Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CiitaP79621 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CiitaP79621 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CiitaP79621 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
CiitaP79621 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CiitaP79621 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC6.8□□□□□ -1.32
CiitaP79621 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm22371-201ENSMUST00000104588 130 ntBASIC6.8□□□□□ -1.32
CiitaP79621 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CiitaP79621 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CiitaP79621 Gm22714-201ENSMUST00000116894 78 ntBASIC6.8□□□□□ -1.32
CiitaP79621 Gm16074-201ENSMUST00000119524 444 ntBASIC6.8□□□□□ -1.32
CiitaP79621 Gm4660-201ENSMUST00000131499 403 ntBASIC6.8□□□□□ -1.32
CiitaP79621 Gm8988-201ENSMUST00000155015 1240 ntBASIC6.8□□□□□ -1.32
CiitaP79621 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC6.8□□□□□ -1.32
CiitaP79621 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CiitaP79621 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.8□□□□□ -1.32
CiitaP79621 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm28080-201ENSMUST00000188552 722 ntBASIC6.8□□□□□ -1.32
CiitaP79621 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CiitaP79621 Gm21524-201ENSMUST00000190499 696 ntBASIC6.8□□□□□ -1.32
CiitaP79621 Gm28492-201ENSMUST00000190899 1019 ntBASIC6.8□□□□□ -1.32
CiitaP79621 Gm21715-201ENSMUST00000191056 694 ntBASIC6.8□□□□□ -1.32
CiitaP79621 Gm8009-201ENSMUST00000191672 436 ntBASIC6.8□□□□□ -1.32
CiitaP79621 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.8□□□□□ -1.32
CiitaP79621 Ighv1-10-201ENSMUST00000194372 355 ntBASIC6.8□□□□□ -1.32
CiitaP79621 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CiitaP79621 Gm37477-201ENSMUST00000195215 884 ntBASIC6.8□□□□□ -1.32
CiitaP79621 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.8□□□□□ -1.32
CiitaP79621 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CiitaP79621 Gm43561-201ENSMUST00000199866 448 ntBASIC6.8□□□□□ -1.32
CiitaP79621 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm38574-201ENSMUST00000211855 640 ntBASIC6.8□□□□□ -1.32
CiitaP79621 Gm10688-201ENSMUST00000214985 520 ntBASIC6.8□□□□□ -1.32
CiitaP79621 Gm7570-201ENSMUST00000215246 698 ntBASIC6.8□□□□□ -1.32
CiitaP79621 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
CiitaP79621 AC157085.1-201ENSMUST00000216343 162 ntBASIC6.8□□□□□ -1.32
CiitaP79621 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CiitaP79621 AC131997.2-201ENSMUST00000227452 362 ntBASIC6.8□□□□□ -1.32
CiitaP79621 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CiitaP79621 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC6.8□□□□□ -1.32
CiitaP79621 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CiitaP79621 Gm22300-201ENSMUST00000082661 126 ntBASIC6.8□□□□□ -1.32
CiitaP79621 Gm25515-201ENSMUST00000083858 157 ntBASIC6.8□□□□□ -1.32
CiitaP79621 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CiitaP79621 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CiitaP79621 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CiitaP79621 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CiitaP79621 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.8□□□□□ -1.32
CiitaP79621 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.8□□□□□ -1.32
CiitaP79621 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CiitaP79621 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CiitaP79621 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CiitaP79621 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CiitaP79621 AC166358.5-201ENSMUST00000220706 1302 ntBASIC6.79□□□□□ -1.32
CiitaP79621 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.79□□□□□ -1.32
CiitaP79621 Gm37056-201ENSMUST00000192141 1865 ntBASIC6.79□□□□□ -1.32
CiitaP79621 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
CiitaP79621 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CiitaP79621 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.79□□□□□ -1.32
CiitaP79621 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CiitaP79621 Gm22953-201ENSMUST00000116724 101 ntBASIC6.79□□□□□ -1.32
CiitaP79621 Gm13114-201ENSMUST00000117605 106 ntBASIC6.79□□□□□ -1.32
CiitaP79621 Gm14755-201ENSMUST00000118037 384 ntBASIC6.79□□□□□ -1.32
CiitaP79621 Gm13772-201ENSMUST00000118431 317 ntBASIC6.79□□□□□ -1.32
CiitaP79621 Gm13818-201ENSMUST00000119441 511 ntBASIC6.79□□□□□ -1.32
CiitaP79621 Gm11198-201ENSMUST00000119771 974 ntBASIC6.79□□□□□ -1.32
CiitaP79621 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.79□□□□□ -1.32
CiitaP79621 Gm6541-201ENSMUST00000165542 561 ntBASIC6.79□□□□□ -1.32
CiitaP79621 Gm6047-201ENSMUST00000167221 574 ntBASIC6.79□□□□□ -1.32
CiitaP79621 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
CiitaP79621 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CiitaP79621 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CiitaP79621 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CiitaP79621 Gm37293-201ENSMUST00000191658 295 ntBASIC6.79□□□□□ -1.32
CiitaP79621 Gm7343-201ENSMUST00000194510 1061 ntBASIC6.79□□□□□ -1.32
CiitaP79621 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC6.79□□□□□ -1.32
CiitaP79621 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC6.79□□□□□ -1.32
CiitaP79621 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CiitaP79621 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CiitaP79621 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
CiitaP79621 AC153971.1-201ENSMUST00000215097 3811 ntBASIC6.79□□□□□ -1.32
CiitaP79621 Gm9088-201ENSMUST00000220237 508 ntBASIC6.79□□□□□ -1.32
CiitaP79621 Vmn1r41-205ENSMUST00000227630 827 ntBASIC6.79□□□□□ -1.32
CiitaP79621 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CiitaP79621 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CiitaP79621 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.79□□□□□ -1.32
CiitaP79621 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.79□□□□□ -1.32
CiitaP79621 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CiitaP79621 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC6.79□□□□□ -1.32
CiitaP79621 Gm38085-201ENSMUST00000195785 3062 ntBASIC6.79□□□□□ -1.32
CiitaP79621 Gm42676-201ENSMUST00000197609 2686 ntBASIC6.79□□□□□ -1.32
CiitaP79621 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CiitaP79621 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CiitaP79621 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CiitaP79621 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CiitaP79621 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms