Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
Shmt1P50431 Gm22953-201ENSMUST00000116724 101 ntBASIC6.83□□□□□ -1.32
Shmt1P50431 Gm13566-201ENSMUST00000117428 1142 ntBASIC6.83□□□□□ -1.32
Shmt1P50431 Gm15421-202ENSMUST00000118224 399 ntBASIC6.83□□□□□ -1.32
Shmt1P50431 Gm5754-201ENSMUST00000118774 892 ntBASIC6.83□□□□□ -1.32
Shmt1P50431 Gm14018-201ENSMUST00000119042 455 ntBASIC6.83□□□□□ -1.32
Shmt1P50431 Calr-ps-201ENSMUST00000121776 485 ntBASIC6.83□□□□□ -1.32
Shmt1P50431 Gm12152-201ENSMUST00000122465 684 ntBASIC6.83□□□□□ -1.32
Shmt1P50431 Gm24383-201ENSMUST00000122691 333 ntBASIC6.83□□□□□ -1.32
Shmt1P50431 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.83□□□□□ -1.32
Shmt1P50431 Gm5125-201ENSMUST00000148614 624 ntBASIC6.83□□□□□ -1.32
Shmt1P50431 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC6.83□□□□□ -1.32
Shmt1P50431 Gm22693-201ENSMUST00000175049 442 ntBASIC6.83□□□□□ -1.32
Shmt1P50431 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Shmt1P50431 Gm27039-201ENSMUST00000182438 962 ntBASIC6.83□□□□□ -1.32
Shmt1P50431 Gm5066-201ENSMUST00000188479 822 ntBASIC6.83□□□□□ -1.32
Shmt1P50431 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC6.83□□□□□ -1.32
Shmt1P50431 Gm21461-201ENSMUST00000200382 863 ntBASIC6.83□□□□□ -1.32
Shmt1P50431 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Shmt1P50431 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Shmt1P50431 AC127302.1-201ENSMUST00000215973 1111 ntBASIC6.83□□□□□ -1.32
Shmt1P50431 AC154219.1-201ENSMUST00000220764 1262 ntBASIC6.83□□□□□ -1.32
Shmt1P50431 Gm9321-201ENSMUST00000221179 778 ntBASIC6.83□□□□□ -1.32
Shmt1P50431 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.83□□□□□ -1.32
Shmt1P50431 Gm9788-201ENSMUST00000057038 906 ntBASIC6.83□□□□□ -1.32
Shmt1P50431 Mir3068-201ENSMUST00000083004 136 ntBASIC6.83□□□□□ -1.32
Shmt1P50431 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Shmt1P50431 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC6.83□□□□□ -1.32
Shmt1P50431 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC6.83□□□□□ -1.32
Shmt1P50431 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC6.83□□□□□ -1.32
Shmt1P50431 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Shmt1P50431 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Shmt1P50431 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.83□□□□□ -1.32
Shmt1P50431 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Shmt1P50431 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Shmt1P50431 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Shmt1P50431 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Shmt1P50431 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Shmt1P50431 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Shmt1P50431 Gm44677-201ENSMUST00000209151 3739 ntBASIC6.83□□□□□ -1.32
Shmt1P50431 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Shmt1P50431 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Shmt1P50431 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Shmt1P50431 Gm13590-201ENSMUST00000120183 1588 ntBASIC6.82□□□□□ -1.32
Shmt1P50431 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Shmt1P50431 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Shmt1P50431 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Shmt1P50431 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Shmt1P50431 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Shmt1P50431 AC130217.2-201ENSMUST00000224009 2990 ntBASIC6.82□□□□□ -1.32
Shmt1P50431 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC6.82□□□□□ -1.32
Shmt1P50431 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Shmt1P50431 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Shmt1P50431 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Shmt1P50431 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Shmt1P50431 Mir680-1-201ENSMUST00000102257 109 ntBASIC6.82□□□□□ -1.32
Shmt1P50431 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Shmt1P50431 Gm11256-201ENSMUST00000118109 829 ntBASIC6.82□□□□□ -1.32
Shmt1P50431 Gm11278-201ENSMUST00000121002 997 ntBASIC6.82□□□□□ -1.32
Shmt1P50431 Gm15618-201ENSMUST00000121610 452 ntBASIC6.82□□□□□ -1.32
Shmt1P50431 Gm25102-201ENSMUST00000122479 112 ntBASIC6.82□□□□□ -1.32
Shmt1P50431 n-R5s30-201ENSMUST00000122624 122 ntBASIC6.82□□□□□ -1.32
Shmt1P50431 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC6.82□□□□□ -1.32
Shmt1P50431 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Shmt1P50431 Gm25904-201ENSMUST00000158491 143 ntBASIC6.82□□□□□ -1.32
Shmt1P50431 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC6.82□□□□□ -1.32
Shmt1P50431 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC6.82□□□□□ -1.32
Shmt1P50431 Gm18006-201ENSMUST00000177411 662 ntBASIC6.82□□□□□ -1.32
Shmt1P50431 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC6.82□□□□□ -1.32
Shmt1P50431 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.82□□□□□ -1.32
Shmt1P50431 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC6.82□□□□□ -1.32
Shmt1P50431 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Shmt1P50431 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.82□□□□□ -1.32
Shmt1P50431 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Shmt1P50431 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Shmt1P50431 AC211878.6-201ENSMUST00000221896 358 ntBASIC6.82□□□□□ -1.32
Shmt1P50431 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC6.82□□□□□ -1.32
Shmt1P50431 AC080021.1-201ENSMUST00000228104 700 ntBASIC6.82□□□□□ -1.32
Shmt1P50431 Cma2-202ENSMUST00000228263 857 ntBASIC6.82□□□□□ -1.32
Shmt1P50431 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Shmt1P50431 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Shmt1P50431 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Shmt1P50431 Gm26442-201ENSMUST00000082588 153 ntBASIC6.82□□□□□ -1.32
Shmt1P50431 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Shmt1P50431 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Shmt1P50431 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Shmt1P50431 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Shmt1P50431 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
Shmt1P50431 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Shmt1P50431 Gm43162-201ENSMUST00000198292 1770 ntBASIC6.82□□□□□ -1.32
Shmt1P50431 Gm20768-201ENSMUST00000199527 2338 ntBASIC6.82□□□□□ -1.32
Shmt1P50431 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Shmt1P50431 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Shmt1P50431 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Shmt1P50431 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Shmt1P50431 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Shmt1P50431 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC6.81□□□□□ -1.32
Shmt1P50431 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Shmt1P50431 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Shmt1P50431 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms