Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 AC108846.4-201ENSMUST00000216783 341 ntBASIC5.96□□□□□ -1.46
Cdx2P43241 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx2P43241 Gm5341-201ENSMUST00000058881 489 ntBASIC5.96□□□□□ -1.46
Cdx2P43241 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx2P43241 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Cdx2P43241 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx2P43241 AC158938.1-201ENSMUST00000225372 6720 ntBASIC5.96□□□□□ -1.46
Cdx2P43241 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Cdx2P43241 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx2P43241 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx2P43241 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx2P43241 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx2P43241 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx2P43241 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx2P43241 Gm38276-201ENSMUST00000192446 1343 ntBASIC5.96□□□□□ -1.46
Cdx2P43241 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC5.96□□□□□ -1.46
Cdx2P43241 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx2P43241 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx2P43241 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx2P43241 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
Cdx2P43241 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Cdx2P43241 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdx2P43241 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdx2P43241 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdx2P43241 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.95□□□□□ -1.46
Cdx2P43241 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdx2P43241 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdx2P43241 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Cdx2P43241 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdx2P43241 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdx2P43241 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdx2P43241 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdx2P43241 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdx2P43241 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdx2P43241 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdx2P43241 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdx2P43241 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdx2P43241 Gm11105-201ENSMUST00000112781 478 ntBASIC5.95□□□□□ -1.46
Cdx2P43241 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdx2P43241 Gm14331-201ENSMUST00000120396 409 ntBASIC5.95□□□□□ -1.46
Cdx2P43241 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC5.95□□□□□ -1.46
Cdx2P43241 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Cdx2P43241 Gm6541-201ENSMUST00000165542 561 ntBASIC5.95□□□□□ -1.46
Cdx2P43241 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdx2P43241 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC5.95□□□□□ -1.46
Cdx2P43241 Gm21772-201ENSMUST00000169213 478 ntBASIC5.95□□□□□ -1.46
Cdx2P43241 Gm17126-201ENSMUST00000172276 523 ntBASIC5.95□□□□□ -1.46
Cdx2P43241 Mir3471-2-201ENSMUST00000174896 102 ntBASIC5.95□□□□□ -1.46
Cdx2P43241 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC5.95□□□□□ -1.46
Cdx2P43241 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.95□□□□□ -1.46
Cdx2P43241 Gm44382-201ENSMUST00000198683 122 ntBASIC5.95□□□□□ -1.46
Cdx2P43241 Gm42652-201ENSMUST00000199073 614 ntBASIC5.95□□□□□ -1.46
Cdx2P43241 Gm31211-201ENSMUST00000199170 253 ntBASIC5.95□□□□□ -1.46
Cdx2P43241 Gm17988-201ENSMUST00000208796 535 ntBASIC5.95□□□□□ -1.46
Cdx2P43241 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC5.95□□□□□ -1.46
Cdx2P43241 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC5.95□□□□□ -1.46
Cdx2P43241 AC134254.2-201ENSMUST00000221262 170 ntBASIC5.95□□□□□ -1.46
Cdx2P43241 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Cdx2P43241 AC165106.1-201ENSMUST00000227580 408 ntBASIC5.95□□□□□ -1.46
Cdx2P43241 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdx2P43241 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Cdx2P43241 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdx2P43241 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Cdx2P43241 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdx2P43241 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Cdx2P43241 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Cdx2P43241 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Cdx2P43241 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Cdx2P43241 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Cdx2P43241 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
Cdx2P43241 Gm21036-201ENSMUST00000207544 2611 ntBASIC5.95□□□□□ -1.46
Cdx2P43241 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Cdx2P43241 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx2P43241 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx2P43241 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Cdx2P43241 Gm9403-201ENSMUST00000196299 2181 ntBASIC5.94□□□□□ -1.46
Cdx2P43241 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC5.94□□□□□ -1.46
Cdx2P43241 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC5.94□□□□□ -1.46
Cdx2P43241 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx2P43241 Gm45061-201ENSMUST00000204395 2095 ntBASIC5.94□□□□□ -1.46
Cdx2P43241 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Cdx2P43241 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC5.94□□□□□ -1.46
Cdx2P43241 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx2P43241 Wnk1-218ENSMUST00000161512 1426 ntBASIC5.94□□□□□ -1.46
Cdx2P43241 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx2P43241 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC5.94□□□□□ -1.46
Cdx2P43241 Gm14335-201ENSMUST00000119165 810 ntBASIC5.94□□□□□ -1.46
Cdx2P43241 Gm14098-201ENSMUST00000119295 623 ntBASIC5.94□□□□□ -1.46
Cdx2P43241 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC5.94□□□□□ -1.46
Cdx2P43241 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Cdx2P43241 Gm24731-201ENSMUST00000158227 131 ntBASIC5.94□□□□□ -1.46
Cdx2P43241 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.94□□□□□ -1.46
Cdx2P43241 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC5.94□□□□□ -1.46
Cdx2P43241 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx2P43241 Gm29778-201ENSMUST00000201667 466 ntBASIC5.94□□□□□ -1.46
Cdx2P43241 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx2P43241 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Cdx2P43241 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.94□□□□□ -1.46
Cdx2P43241 Gm5306-201ENSMUST00000203325 757 ntBASIC5.94□□□□□ -1.46
Cdx2P43241 Gm7890-201ENSMUST00000204877 601 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms