Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Traf1P39428 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC7.32□□□□□ -1.24
Traf1P39428 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Traf1P39428 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Traf1P39428 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Traf1P39428 Gm44215-201ENSMUST00000204910 2711 ntBASIC7.32□□□□□ -1.24
Traf1P39428 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Traf1P39428 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Traf1P39428 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Traf1P39428 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Traf1P39428 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Traf1P39428 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Traf1P39428 Gm13679-201ENSMUST00000118678 484 ntBASIC7.32□□□□□ -1.24
Traf1P39428 Gm14900-201ENSMUST00000120304 733 ntBASIC7.32□□□□□ -1.24
Traf1P39428 Gm26410-201ENSMUST00000157670 261 ntBASIC7.32□□□□□ -1.24
Traf1P39428 Gm22094-201ENSMUST00000158976 117 ntBASIC7.32□□□□□ -1.24
Traf1P39428 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC7.32□□□□□ -1.24
Traf1P39428 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Traf1P39428 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Traf1P39428 Mir7072-201ENSMUST00000184542 60 ntBASIC7.32□□□□□ -1.24
Traf1P39428 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC7.32□□□□□ -1.24
Traf1P39428 Gm7626-201ENSMUST00000195801 353 ntBASIC7.32□□□□□ -1.24
Traf1P39428 Gm19739-201ENSMUST00000195941 153 ntBASIC7.32□□□□□ -1.24
Traf1P39428 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Traf1P39428 Igkv12-67-201ENSMUST00000197806 354 ntBASIC7.32□□□□□ -1.24
Traf1P39428 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC7.32□□□□□ -1.24
Traf1P39428 Gm45127-201ENSMUST00000205984 1015 ntBASIC7.32□□□□□ -1.24
Traf1P39428 Gm45343-201ENSMUST00000210452 828 ntBASIC7.32□□□□□ -1.24
Traf1P39428 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC7.32□□□□□ -1.24
Traf1P39428 Gm45514-201ENSMUST00000211531 689 ntBASIC7.32□□□□□ -1.24
Traf1P39428 Gm7570-201ENSMUST00000215246 698 ntBASIC7.32□□□□□ -1.24
Traf1P39428 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Traf1P39428 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
Traf1P39428 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Traf1P39428 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC7.32□□□□□ -1.24
Traf1P39428 Gm42613-201ENSMUST00000199975 1931 ntBASIC7.32□□□□□ -1.24
Traf1P39428 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC7.32□□□□□ -1.24
Traf1P39428 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
Traf1P39428 Gm45457-201ENSMUST00000209931 3089 ntBASIC7.32□□□□□ -1.24
Traf1P39428 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
Traf1P39428 Gm2080-201ENSMUST00000211299 1573 ntBASIC7.32□□□□□ -1.24
Traf1P39428 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC7.32□□□□□ -1.24
Traf1P39428 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Traf1P39428 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Traf1P39428 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Traf1P39428 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Traf1P39428 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC7.32□□□□□ -1.24
Traf1P39428 AC123629.1-201ENSMUST00000225669 1364 ntBASIC7.32□□□□□ -1.24
Traf1P39428 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Traf1P39428 AC107232.1-201ENSMUST00000227785 1503 ntBASIC7.32□□□□□ -1.24
Traf1P39428 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
Traf1P39428 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
Traf1P39428 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Traf1P39428 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Traf1P39428 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Traf1P39428 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC7.31□□□□□ -1.24
Traf1P39428 AC158938.1-201ENSMUST00000225372 6720 ntBASIC7.31□□□□□ -1.24
Traf1P39428 Gm43190-201ENSMUST00000187850 1779 ntBASIC7.31□□□□□ -1.24
Traf1P39428 Gm44046-201ENSMUST00000203145 2678 ntBASIC7.31□□□□□ -1.24
Traf1P39428 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Traf1P39428 Gm22952-201ENSMUST00000116720 120 ntBASIC7.31□□□□□ -1.24
Traf1P39428 Gm13566-201ENSMUST00000117428 1142 ntBASIC7.31□□□□□ -1.24
Traf1P39428 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
Traf1P39428 Gm11902-201ENSMUST00000118849 270 ntBASIC7.31□□□□□ -1.24
Traf1P39428 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC7.31□□□□□ -1.24
Traf1P39428 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Traf1P39428 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Traf1P39428 Gm21542-201ENSMUST00000182307 993 ntBASIC7.31□□□□□ -1.24
Traf1P39428 Gm26923-201ENSMUST00000182615 996 ntBASIC7.31□□□□□ -1.24
Traf1P39428 Gm28527-201ENSMUST00000185210 297 ntBASIC7.31□□□□□ -1.24
Traf1P39428 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Traf1P39428 Gm29234-201ENSMUST00000187452 1262 ntBASIC7.31□□□□□ -1.24
Traf1P39428 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC7.31□□□□□ -1.24
Traf1P39428 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC7.31□□□□□ -1.24
Traf1P39428 Gm44571-201ENSMUST00000208092 533 ntBASIC7.31□□□□□ -1.24
Traf1P39428 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC7.31□□□□□ -1.24
Traf1P39428 Gm2996-201ENSMUST00000211398 537 ntBASIC7.31□□□□□ -1.24
Traf1P39428 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC7.31□□□□□ -1.24
Traf1P39428 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Traf1P39428 CT030254.1-201ENSMUST00000225450 1078 ntBASIC7.31□□□□□ -1.24
Traf1P39428 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Traf1P39428 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC7.31□□□□□ -1.24
Traf1P39428 Olfr519-201ENSMUST00000084752 960 ntBASIC7.31□□□□□ -1.24
Traf1P39428 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC7.31□□□□□ -1.24
Traf1P39428 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC7.31□□□□□ -1.24
Traf1P39428 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Traf1P39428 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC7.31□□□□□ -1.24
Traf1P39428 Gm37140-201ENSMUST00000192914 1684 ntBASIC7.31□□□□□ -1.24
Traf1P39428 Gm19368-201ENSMUST00000221258 4424 ntBASIC7.31□□□□□ -1.24
Traf1P39428 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
Traf1P39428 Gm43611-201ENSMUST00000196656 4352 ntBASIC7.31□□□□□ -1.24
Traf1P39428 Gm43637-201ENSMUST00000202206 2926 ntBASIC7.31□□□□□ -1.24
Traf1P39428 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Traf1P39428 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Traf1P39428 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC7.3□□□□□ -1.24
Traf1P39428 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Traf1P39428 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Traf1P39428 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Traf1P39428 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Traf1P39428 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms