Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 AC139197.1-201ENSMUST00000228332 813 ntBASIC5.64□□□□□ -1.51
Hoxc5P32043 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Hoxc5P32043 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Hoxc5P32043 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Hoxc5P32043 Gm22300-201ENSMUST00000082661 126 ntBASIC5.64□□□□□ -1.51
Hoxc5P32043 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Hoxc5P32043 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Hoxc5P32043 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Hoxc5P32043 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Hoxc5P32043 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Hoxc5P32043 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.64□□□□□ -1.51
Hoxc5P32043 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Hoxc5P32043 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Hoxc5P32043 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Hoxc5P32043 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxc5P32043 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxc5P32043 AC124183.1-201ENSMUST00000222367 2135 ntBASIC5.63□□□□□ -1.51
Hoxc5P32043 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Hoxc5P32043 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Hoxc5P32043 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxc5P32043 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxc5P32043 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxc5P32043 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxc5P32043 Robo2-210ENSMUST00000226478 8059 ntBASIC5.63□□□□□ -1.51
Hoxc5P32043 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.63□□□□□ -1.51
Hoxc5P32043 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Hoxc5P32043 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm37953-201ENSMUST00000195293 1884 ntBASIC5.63□□□□□ -1.51
Hoxc5P32043 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm25346-201ENSMUST00000104509 128 ntBASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm13176-201ENSMUST00000117910 477 ntBASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm11256-201ENSMUST00000118109 829 ntBASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm15967-201ENSMUST00000120027 1116 ntBASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm15164-201ENSMUST00000122203 271 ntBASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC5.63□□□□□ -1.51
Hoxc5P32043 Mir1960-201ENSMUST00000157488 78 ntBASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm22701-201ENSMUST00000175371 291 ntBASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC5.63□□□□□ -1.51
Hoxc5P32043 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm37784-201ENSMUST00000193233 189 ntBASIC5.63□□□□□ -1.51
Hoxc5P32043 Ighv1-45-201ENSMUST00000193677 352 ntBASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm32158-201ENSMUST00000200135 404 ntBASIC5.63□□□□□ -1.51
Hoxc5P32043 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC5.63□□□□□ -1.51
Hoxc5P32043 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm6070-201ENSMUST00000207275 419 ntBASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm7351-201ENSMUST00000210745 580 ntBASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm45448-201ENSMUST00000211739 209 ntBASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm3785-201ENSMUST00000221000 202 ntBASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm9237-201ENSMUST00000221499 548 ntBASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm2614-201ENSMUST00000223227 403 ntBASIC5.63□□□□□ -1.51
Hoxc5P32043 AC102676.1-201ENSMUST00000228131 719 ntBASIC5.63□□□□□ -1.51
Hoxc5P32043 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxc5P32043 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC5.63□□□□□ -1.51
Hoxc5P32043 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Hoxc5P32043 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxc5P32043 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Hoxc5P32043 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxc5P32043 Gm43981-201ENSMUST00000203285 1467 ntBASIC5.63□□□□□ -1.51
Hoxc5P32043 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxc5P32043 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Hoxc5P32043 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Hoxc5P32043 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Hoxc5P32043 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Hoxc5P32043 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC5.62□□□□□ -1.51
Hoxc5P32043 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxc5P32043 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.62□□□□□ -1.51
Hoxc5P32043 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxc5P32043 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxc5P32043 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxc5P32043 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.62□□□□□ -1.51
Hoxc5P32043 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Hoxc5P32043 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.62□□□□□ -1.51
Hoxc5P32043 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.62□□□□□ -1.51
Hoxc5P32043 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Hoxc5P32043 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxc5P32043 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxc5P32043 Gm22284-201ENSMUST00000104132 132 ntBASIC5.62□□□□□ -1.51
Hoxc5P32043 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Hoxc5P32043 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.62□□□□□ -1.51
Hoxc5P32043 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Hoxc5P32043 Gm12442-201ENSMUST00000118372 338 ntBASIC5.62□□□□□ -1.51
Hoxc5P32043 Gm7058-201ENSMUST00000119209 902 ntBASIC5.62□□□□□ -1.51
Hoxc5P32043 Gm11370-201ENSMUST00000120583 260 ntBASIC5.62□□□□□ -1.51
Hoxc5P32043 Gm12804-201ENSMUST00000121030 999 ntBASIC5.62□□□□□ -1.51
Hoxc5P32043 Sms-ps-201ENSMUST00000121773 1101 ntBASIC5.62□□□□□ -1.51
Hoxc5P32043 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxc5P32043 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC5.62□□□□□ -1.51
Hoxc5P32043 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxc5P32043 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Hoxc5P32043 Gm16298-201ENSMUST00000161107 420 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms