Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gm13642-201ENSMUST00000121697 381 ntBASIC6.29□□□□□ -1.4
Hoxc11P31313 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm12152-201ENSMUST00000122465 684 ntBASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.29□□□□□ -1.4
Hoxc11P31313 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC6.29□□□□□ -1.4
Hoxc11P31313 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC6.29□□□□□ -1.4
Hoxc11P31313 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Hoxc11P31313 Cfhr3-201ENSMUST00000170441 1022 ntBASIC6.29□□□□□ -1.4
Hoxc11P31313 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Hoxc11P31313 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.29□□□□□ -1.4
Hoxc11P31313 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxc11P31313 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm28455-201ENSMUST00000189105 1290 ntBASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.29□□□□□ -1.4
Hoxc11P31313 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm5694-201ENSMUST00000195648 641 ntBASIC6.29□□□□□ -1.4
Hoxc11P31313 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm9057-201ENSMUST00000198791 296 ntBASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm7554-201ENSMUST00000202282 574 ntBASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm44163-201ENSMUST00000205140 475 ntBASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC6.29□□□□□ -1.4
Hoxc11P31313 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm46191-201ENSMUST00000218899 433 ntBASIC6.29□□□□□ -1.4
Hoxc11P31313 AC131117.2-203ENSMUST00000225886 950 ntBASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm5436-201ENSMUST00000058103 643 ntBASIC6.29□□□□□ -1.4
Hoxc11P31313 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm6990-201ENSMUST00000086830 348 ntBASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm10205-201ENSMUST00000087431 234 ntBASIC6.29□□□□□ -1.4
Hoxc11P31313 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Hoxc11P31313 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm10705-201ENSMUST00000098980 461 ntBASIC6.29□□□□□ -1.4
Hoxc11P31313 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm45424-201ENSMUST00000210575 3300 ntBASIC6.29□□□□□ -1.4
Hoxc11P31313 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm37076-201ENSMUST00000192033 2294 ntBASIC6.29□□□□□ -1.4
Hoxc11P31313 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Hoxc11P31313 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC6.29□□□□□ -1.4
Hoxc11P31313 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Hoxc11P31313 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
Hoxc11P31313 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hoxc11P31313 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Hoxc11P31313 Gm38120-201ENSMUST00000195506 4642 ntBASIC6.29□□□□□ -1.4
Hoxc11P31313 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Hoxc11P31313 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm42975-201ENSMUST00000200612 1491 ntBASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxc11P31313 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxc11P31313 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm44231-201ENSMUST00000204106 4075 ntBASIC6.28□□□□□ -1.4
Hoxc11P31313 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Hoxc11P31313 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.28□□□□□ -1.4
Hoxc11P31313 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxc11P31313 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxc11P31313 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxc11P31313 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxc11P31313 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6.28□□□□□ -1.4
Hoxc11P31313 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxc11P31313 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxc11P31313 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Hoxc11P31313 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm11271-201ENSMUST00000116054 440 ntBASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm12438-201ENSMUST00000122034 336 ntBASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxc11P31313 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm5125-201ENSMUST00000148614 624 ntBASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm9064-201ENSMUST00000163579 566 ntBASIC6.28□□□□□ -1.4
Hoxc11P31313 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm27348-201ENSMUST00000184511 170 ntBASIC6.28□□□□□ -1.4
Hoxc11P31313 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm28586-201ENSMUST00000189857 456 ntBASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxc11P31313 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm44361-201ENSMUST00000197960 94 ntBASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm43033-201ENSMUST00000199682 425 ntBASIC6.28□□□□□ -1.4
Hoxc11P31313 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC6.28□□□□□ -1.4
Hoxc11P31313 Gm8291-201ENSMUST00000209635 1261 ntBASIC6.28□□□□□ -1.4
Hoxc11P31313 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC6.28□□□□□ -1.4
Hoxc11P31313 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC6.28□□□□□ -1.4
Hoxc11P31313 CT030124.1-201ENSMUST00000217130 235 ntBASIC6.28□□□□□ -1.4
Hoxc11P31313 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.28□□□□□ -1.4
Hoxc11P31313 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Hoxc11P31313 AC123061.2-201ENSMUST00000226234 802 ntBASIC6.28□□□□□ -1.4
Hoxc11P31313 AC137902.1-201ENSMUST00000228184 102 ntBASIC6.28□□□□□ -1.4
Hoxc11P31313 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxc11P31313 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Hoxc11P31313 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Hoxc11P31313 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Hoxc11P31313 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Hoxc11P31313 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hoxc11P31313 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms