Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm17822-201ENSMUST00000204307 351 ntBASIC5.14□□□□□ -1.59
Cdx1P18111 Gm44770-201ENSMUST00000205395 1264 ntBASIC5.14□□□□□ -1.59
Cdx1P18111 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Cdx1P18111 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC5.14□□□□□ -1.59
Cdx1P18111 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC5.14□□□□□ -1.59
Cdx1P18111 Olfr923-204ENSMUST00000219798 1068 ntBASIC5.14□□□□□ -1.59
Cdx1P18111 AC079644.2-201ENSMUST00000220581 322 ntBASIC5.14□□□□□ -1.59
Cdx1P18111 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC5.14□□□□□ -1.59
Cdx1P18111 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.14□□□□□ -1.59
Cdx1P18111 AC154380.1-201ENSMUST00000226804 720 ntBASIC5.14□□□□□ -1.59
Cdx1P18111 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cdx1P18111 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Cdx1P18111 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Cdx1P18111 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Cdx1P18111 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
Cdx1P18111 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cdx1P18111 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC5.14□□□□□ -1.59
Cdx1P18111 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cdx1P18111 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cdx1P18111 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cdx1P18111 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Cdx1P18111 Gm37217-201ENSMUST00000194017 3521 ntBASIC5.14□□□□□ -1.59
Cdx1P18111 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.14□□□□□ -1.59
Cdx1P18111 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Cdx1P18111 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Cdx1P18111 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx1P18111 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Cdx1P18111 Gm5454-201ENSMUST00000052030 1453 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx1P18111 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Cdx1P18111 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Cdx1P18111 Gm43410-201ENSMUST00000197510 2234 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx1P18111 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx1P18111 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx1P18111 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx1P18111 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx1P18111 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx1P18111 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Cdx1P18111 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx1P18111 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx1P18111 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx1P18111 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 Gm22774-201ENSMUST00000102084 109 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC5.13□□□□□ -1.59
Cdx1P18111 Gm16073-201ENSMUST00000116032 517 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 Gm12740-201ENSMUST00000118794 308 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Cdx1P18111 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 Mir1900-201ENSMUST00000122714 78 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC5.13□□□□□ -1.59
Cdx1P18111 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx1P18111 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC5.13□□□□□ -1.59
Cdx1P18111 Gm22235-201ENSMUST00000157085 110 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC5.13□□□□□ -1.59
Cdx1P18111 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Cdx1P18111 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx1P18111 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Cdx1P18111 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx1P18111 Gm18808-201ENSMUST00000173316 462 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Cdx1P18111 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Cdx1P18111 Gm8245-201ENSMUST00000182434 987 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx1P18111 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC5.13□□□□□ -1.59
Cdx1P18111 Gm43063-201ENSMUST00000198198 1081 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx1P18111 Gm29781-201ENSMUST00000203862 478 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx1P18111 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx1P18111 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC5.13□□□□□ -1.59
Cdx1P18111 Gm46231-201ENSMUST00000220152 314 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 AC155270.1-202ENSMUST00000221503 352 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 AC127242.3-201ENSMUST00000222009 580 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 CT954323.2-201ENSMUST00000222056 213 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 AC165157.1-201ENSMUST00000222981 580 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 AC124489.3-201ENSMUST00000224037 278 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 AC124395.1-201ENSMUST00000225940 707 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 AC154323.2-201ENSMUST00000226557 1151 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 AC133203.1-201ENSMUST00000228241 301 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx1P18111 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Cdx1P18111 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx1P18111 n-R5s89-201ENSMUST00000083532 104 ntBASIC5.13□□□□□ -1.59
Cdx1P18111 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx1P18111 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
Cdx1P18111 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
Cdx1P18111 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx1P18111 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Cdx1P18111 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx1P18111 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx1P18111 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx1P18111 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Cdx1P18111 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx1P18111 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Cdx1P18111 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms