Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Col4a1P02463 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Col4a1P02463 Ep400-204ENSMUST00000112436 10685 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col4a1P02463 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Col4a1P02463 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Col4a1P02463 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Col4a1P02463 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Col4a1P02463 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col4a1P02463 Gm16270-201ENSMUST00000160327 3238 ntBASIC7.41□□□□□ -1.22
Col4a1P02463 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Col4a1P02463 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Col4a1P02463 Gm45528-201ENSMUST00000209854 3145 ntBASIC7.41□□□□□ -1.22
Col4a1P02463 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Col4a1P02463 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Col4a1P02463 Mir1188-201ENSMUST00000116756 120 ntBASIC7.41□□□□□ -1.22
Col4a1P02463 Gm15044-201ENSMUST00000120703 598 ntBASIC7.41□□□□□ -1.22
Col4a1P02463 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC7.41□□□□□ -1.22
Col4a1P02463 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Col4a1P02463 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col4a1P02463 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC7.41□□□□□ -1.22
Col4a1P02463 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC7.41□□□□□ -1.22
Col4a1P02463 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC7.41□□□□□ -1.22
Col4a1P02463 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC7.41□□□□□ -1.22
Col4a1P02463 CU062626.1-201ENSMUST00000225248 505 ntBASIC7.41□□□□□ -1.22
Col4a1P02463 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Col4a1P02463 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Col4a1P02463 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Col4a1P02463 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Col4a1P02463 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Col4a1P02463 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col4a1P02463 Nfasc-202ENSMUST00000094569 9739 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col4a1P02463 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Col4a1P02463 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col4a1P02463 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC7.4□□□□□ -1.22
Col4a1P02463 Vmn1r199-202ENSMUST00000227685 5713 ntAPPRIS P2 BASIC7.4□□□□□ -1.22
Col4a1P02463 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC7.4□□□□□ -1.22
Col4a1P02463 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Col4a1P02463 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Col4a1P02463 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
Col4a1P02463 Gm13770-201ENSMUST00000117149 305 ntBASIC7.4□□□□□ -1.23
Col4a1P02463 Gm11774-201ENSMUST00000118601 293 ntBASIC7.4□□□□□ -1.23
Col4a1P02463 Gm11804-201ENSMUST00000121663 468 ntBASIC7.4□□□□□ -1.23
Col4a1P02463 Gm22235-201ENSMUST00000157085 110 ntBASIC7.4□□□□□ -1.23
Col4a1P02463 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
Col4a1P02463 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC7.4□□□□□ -1.23
Col4a1P02463 Gm21241-201ENSMUST00000179551 934 ntBASIC7.4□□□□□ -1.23
Col4a1P02463 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a1P02463 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a1P02463 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a1P02463 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a1P02463 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a1P02463 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a1P02463 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
Col4a1P02463 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a1P02463 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a1P02463 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a1P02463 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a1P02463 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a1P02463 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a1P02463 Gm20819-201ENSMUST00000191091 925 ntBASIC7.4□□□□□ -1.23
Col4a1P02463 Gm20871-201ENSMUST00000191322 931 ntBASIC7.4□□□□□ -1.23
Col4a1P02463 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a1P02463 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a1P02463 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a1P02463 Gm38384-201ENSMUST00000195413 1122 ntBASIC7.4□□□□□ -1.23
Col4a1P02463 Mir6994-201ENSMUST00000198985 73 ntBASIC7.4□□□□□ -1.23
Col4a1P02463 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a1P02463 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC7.4□□□□□ -1.23
Col4a1P02463 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC7.4□□□□□ -1.23
Col4a1P02463 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
Col4a1P02463 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC7.4□□□□□ -1.23
Col4a1P02463 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a1P02463 AW146154-201ENSMUST00000098509 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a1P02463 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a1P02463 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC7.4□□□□□ -1.23
Col4a1P02463 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.23
Col4a1P02463 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a1P02463 Gm37082-201ENSMUST00000192629 1927 ntBASIC7.4□□□□□ -1.23
Col4a1P02463 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.23
Col4a1P02463 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.23
Col4a1P02463 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
Col4a1P02463 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col4a1P02463 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a1P02463 Plec-221ENSMUST00000171562 14944 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a1P02463 Plec-204ENSMUST00000072692 14944 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a1P02463 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a1P02463 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a1P02463 Nrp2-206ENSMUST00000114157 6357 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a1P02463 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a1P02463 Ercc6-201ENSMUST00000066807 8423 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Col4a1P02463 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
Col4a1P02463 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Col4a1P02463 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a1P02463 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col4a1P02463 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC7.39□□□□□ -1.23
Col4a1P02463 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Col4a1P02463 Gm8501-201ENSMUST00000117684 432 ntBASIC7.39□□□□□ -1.23
Col4a1P02463 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC7.39□□□□□ -1.23
Col4a1P02463 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC7.39□□□□□ -1.23
Col4a1P02463 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms