Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC4.47□□□□□ -1.69
TcraP01849 Gm2975-201ENSMUST00000209710 820 ntBASIC4.47□□□□□ -1.69
TcraP01849 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC4.47□□□□□ -1.69
TcraP01849 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TcraP01849 AC164550.1-201ENSMUST00000217821 1066 ntBASIC4.47□□□□□ -1.69
TcraP01849 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC4.47□□□□□ -1.69
TcraP01849 Gm4012-201ENSMUST00000221504 581 ntBASIC4.47□□□□□ -1.69
TcraP01849 AC154558.1-201ENSMUST00000222278 415 ntBASIC4.47□□□□□ -1.69
TcraP01849 AC153794.2-201ENSMUST00000222650 550 ntBASIC4.47□□□□□ -1.69
TcraP01849 AC108947.1-201ENSMUST00000224274 1000 ntBASIC4.47□□□□□ -1.69
TcraP01849 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TcraP01849 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TcraP01849 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
TcraP01849 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
TcraP01849 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TcraP01849 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC4.47□□□□□ -1.69
TcraP01849 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TcraP01849 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TcraP01849 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TcraP01849 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TcraP01849 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TcraP01849 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TcraP01849 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC4.47□□□□□ -1.69
TcraP01849 Gm45632-201ENSMUST00000211532 1888 ntBASIC4.47□□□□□ -1.69
TcraP01849 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TcraP01849 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TcraP01849 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TcraP01849 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
TcraP01849 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TcraP01849 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC4.47□□□□□ -1.69
TcraP01849 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
TcraP01849 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TcraP01849 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TcraP01849 Gm45311-201ENSMUST00000211086 1330 ntBASIC4.46□□□□□ -1.69
TcraP01849 AC139750.1-201ENSMUST00000223962 1300 ntBASIC4.46□□□□□ -1.69
TcraP01849 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
TcraP01849 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.69
TcraP01849 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC4.46□□□□□ -1.69
TcraP01849 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
TcraP01849 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
TcraP01849 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TcraP01849 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TcraP01849 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
TcraP01849 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TcraP01849 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TcraP01849 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC4.46□□□□□ -1.7
TcraP01849 Gm5844-201ENSMUST00000119417 2191 ntBASIC4.46□□□□□ -1.7
TcraP01849 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TcraP01849 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC4.46□□□□□ -1.7
TcraP01849 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
TcraP01849 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
TcraP01849 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC4.46□□□□□ -1.7
TcraP01849 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TcraP01849 Mir688-201ENSMUST00000102055 75 ntBASIC4.46□□□□□ -1.7
TcraP01849 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TcraP01849 Gm24173-201ENSMUST00000104130 128 ntBASIC4.46□□□□□ -1.7
TcraP01849 Gm25564-201ENSMUST00000104604 132 ntBASIC4.46□□□□□ -1.7
TcraP01849 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
TcraP01849 Gm13768-201ENSMUST00000116469 929 ntBASIC4.46□□□□□ -1.7
TcraP01849 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TcraP01849 Gm11889-201ENSMUST00000118402 1079 ntBASIC4.46□□□□□ -1.7
TcraP01849 Gm12135-201ENSMUST00000119170 466 ntBASIC4.46□□□□□ -1.7
TcraP01849 Gm16113-201ENSMUST00000159629 372 ntBASIC4.46□□□□□ -1.7
TcraP01849 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TcraP01849 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC4.46□□□□□ -1.7
TcraP01849 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC4.46□□□□□ -1.7
TcraP01849 Gm5345-201ENSMUST00000183076 1014 ntBASIC4.46□□□□□ -1.7
TcraP01849 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC4.46□□□□□ -1.7
TcraP01849 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC4.46□□□□□ -1.7
TcraP01849 Gm28114-201ENSMUST00000187232 379 ntBASIC4.46□□□□□ -1.7
TcraP01849 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC4.46□□□□□ -1.7
TcraP01849 Gm37477-201ENSMUST00000195215 884 ntBASIC4.46□□□□□ -1.7
TcraP01849 Gm38328-201ENSMUST00000195582 317 ntBASIC4.46□□□□□ -1.7
TcraP01849 Ighv8-15-201ENSMUST00000197770 294 ntBASIC4.46□□□□□ -1.7
TcraP01849 Gm43033-201ENSMUST00000199682 425 ntBASIC4.46□□□□□ -1.7
TcraP01849 Gm7463-201ENSMUST00000201541 547 ntBASIC4.46□□□□□ -1.7
TcraP01849 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC4.46□□□□□ -1.7
TcraP01849 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC4.46□□□□□ -1.7
TcraP01849 Gm8911-201ENSMUST00000213986 652 ntBASIC4.46□□□□□ -1.7
TcraP01849 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC4.46□□□□□ -1.7
TcraP01849 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TcraP01849 Gm7252-201ENSMUST00000223284 456 ntBASIC4.46□□□□□ -1.7
TcraP01849 CT030195.1-201ENSMUST00000223887 378 ntBASIC4.46□□□□□ -1.7
TcraP01849 AC133598.4-201ENSMUST00000224577 454 ntBASIC4.46□□□□□ -1.7
TcraP01849 AC138329.1-201ENSMUST00000225040 471 ntBASIC4.46□□□□□ -1.7
TcraP01849 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TcraP01849 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
TcraP01849 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TcraP01849 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TcraP01849 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TcraP01849 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TcraP01849 Gm24411-201ENSMUST00000083428 131 ntBASIC4.46□□□□□ -1.7
TcraP01849 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TcraP01849 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
TcraP01849 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TcraP01849 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
TcraP01849 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
TcraP01849 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TcraP01849 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TcraP01849 AC153912.2-201ENSMUST00000215840 2015 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms