Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC5.8□□□□□ -1.48
Rdh5O55240 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Rdh5O55240 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rdh5O55240 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC5.8□□□□□ -1.48
Rdh5O55240 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rdh5O55240 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rdh5O55240 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rdh5O55240 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Rdh5O55240 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Rdh5O55240 Gm24709-201ENSMUST00000104123 132 ntBASIC5.8□□□□□ -1.48
Rdh5O55240 Gm22714-201ENSMUST00000116894 78 ntBASIC5.8□□□□□ -1.48
Rdh5O55240 Gm14054-201ENSMUST00000120744 704 ntBASIC5.8□□□□□ -1.48
Rdh5O55240 Gm4660-201ENSMUST00000131499 403 ntBASIC5.8□□□□□ -1.48
Rdh5O55240 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC5.8□□□□□ -1.48
Rdh5O55240 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC5.8□□□□□ -1.48
Rdh5O55240 Gm24435-201ENSMUST00000157886 110 ntBASIC5.8□□□□□ -1.48
Rdh5O55240 Gm16269-201ENSMUST00000160532 409 ntBASIC5.8□□□□□ -1.48
Rdh5O55240 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.8□□□□□ -1.48
Rdh5O55240 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Rdh5O55240 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Rdh5O55240 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Rdh5O55240 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.8□□□□□ -1.48
Rdh5O55240 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC5.8□□□□□ -1.48
Rdh5O55240 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rdh5O55240 Gm3544-201ENSMUST00000196129 305 ntBASIC5.8□□□□□ -1.48
Rdh5O55240 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rdh5O55240 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Rdh5O55240 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rdh5O55240 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC5.8□□□□□ -1.48
Rdh5O55240 Gm18851-201ENSMUST00000210087 1058 ntBASIC5.8□□□□□ -1.48
Rdh5O55240 Gm3785-201ENSMUST00000221000 202 ntBASIC5.8□□□□□ -1.48
Rdh5O55240 AC091783.2-201ENSMUST00000224626 740 ntBASIC5.8□□□□□ -1.48
Rdh5O55240 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Rdh5O55240 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.8□□□□□ -1.48
Rdh5O55240 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Rdh5O55240 Gm7108-201ENSMUST00000118038 3407 ntBASIC5.8□□□□□ -1.48
Rdh5O55240 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rdh5O55240 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Rdh5O55240 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.8□□□□□ -1.48
Rdh5O55240 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rdh5O55240 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rdh5O55240 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Rdh5O55240 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC5.79□□□□□ -1.48
Rdh5O55240 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC5.79□□□□□ -1.48
Rdh5O55240 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Rdh5O55240 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rdh5O55240 AC164297.2-201ENSMUST00000224388 1508 ntBASIC5.79□□□□□ -1.48
Rdh5O55240 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Rdh5O55240 Gm43874-201ENSMUST00000204853 2798 ntBASIC5.79□□□□□ -1.48
Rdh5O55240 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rdh5O55240 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Rdh5O55240 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Rdh5O55240 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC5.79□□□□□ -1.48
Rdh5O55240 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rdh5O55240 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
Rdh5O55240 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rdh5O55240 Gm10062-201ENSMUST00000072180 1470 ntBASIC5.79□□□□□ -1.48
Rdh5O55240 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Rdh5O55240 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
Rdh5O55240 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Rdh5O55240 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Rdh5O55240 Gm14510-201ENSMUST00000116165 1092 ntBASIC5.79□□□□□ -1.48
Rdh5O55240 Gm12262-201ENSMUST00000119915 305 ntBASIC5.79□□□□□ -1.48
Rdh5O55240 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC5.79□□□□□ -1.48
Rdh5O55240 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC5.79□□□□□ -1.48
Rdh5O55240 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC5.79□□□□□ -1.48
Rdh5O55240 Gm22701-201ENSMUST00000175371 291 ntBASIC5.79□□□□□ -1.48
Rdh5O55240 Gm20620-201ENSMUST00000177528 168 ntBASIC5.79□□□□□ -1.48
Rdh5O55240 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC5.79□□□□□ -1.48
Rdh5O55240 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Rdh5O55240 Gm37475-201ENSMUST00000193107 1015 ntBASIC5.79□□□□□ -1.48
Rdh5O55240 Gm37784-201ENSMUST00000193233 189 ntBASIC5.79□□□□□ -1.48
Rdh5O55240 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC5.79□□□□□ -1.48
Rdh5O55240 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Rdh5O55240 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC5.79□□□□□ -1.48
Rdh5O55240 Gm19212-201ENSMUST00000216642 862 ntBASIC5.79□□□□□ -1.48
Rdh5O55240 CT010431.1-201ENSMUST00000221249 1080 ntBASIC5.79□□□□□ -1.48
Rdh5O55240 Gm2614-201ENSMUST00000223227 403 ntBASIC5.79□□□□□ -1.48
Rdh5O55240 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Rdh5O55240 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Rdh5O55240 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rdh5O55240 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Rdh5O55240 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC5.79□□□□□ -1.48
Rdh5O55240 Gm42541-201ENSMUST00000199871 2249 ntBASIC5.79□□□□□ -1.48
Rdh5O55240 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rdh5O55240 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Rdh5O55240 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Rdh5O55240 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Rdh5O55240 Gm9521-201ENSMUST00000206656 1516 ntBASIC5.79□□□□□ -1.48
Rdh5O55240 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Rdh5O55240 Gm37897-201ENSMUST00000192613 3561 ntBASIC5.78□□□□□ -1.48
Rdh5O55240 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.78□□□□□ -1.48
Rdh5O55240 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.78□□□□□ -1.48
Rdh5O55240 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Rdh5O55240 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Rdh5O55240 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC5.78□□□□□ -1.48
Rdh5O55240 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
Rdh5O55240 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Rdh5O55240 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Rdh5O55240 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms