Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ccdc180J3QNE4 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC11.26□□□□□ -0.61
Ccdc180J3QNE4 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Ccdc180J3QNE4 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc180J3QNE4 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc180J3QNE4 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Ccdc180J3QNE4 Gm42613-201ENSMUST00000199975 1931 ntBASIC11.25□□□□□ -0.61
Ccdc180J3QNE4 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc180J3QNE4 Gm36981-201ENSMUST00000192340 4485 ntBASIC11.25□□□□□ -0.61
Ccdc180J3QNE4 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc180J3QNE4 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc180J3QNE4 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC11.25□□□□□ -0.61
Ccdc180J3QNE4 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC11.25□□□□□ -0.61
Ccdc180J3QNE4 Ighv5-19-201ENSMUST00000193466 297 ntBASIC11.25□□□□□ -0.61
Ccdc180J3QNE4 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC11.25□□□□□ -0.61
Ccdc180J3QNE4 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Ccdc180J3QNE4 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc180J3QNE4 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Ccdc180J3QNE4 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc180J3QNE4 Gm14245-201ENSMUST00000118939 1843 ntBASIC11.25□□□□□ -0.61
Ccdc180J3QNE4 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc180J3QNE4 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccdc180J3QNE4 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc180J3QNE4 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Ccdc180J3QNE4 Gm27225-201ENSMUST00000183833 557 ntBASIC11.24□□□□□ -0.61
Ccdc180J3QNE4 Gm28973-201ENSMUST00000189310 613 ntBASIC11.24□□□□□ -0.61
Ccdc180J3QNE4 Gm37511-201ENSMUST00000192901 294 ntBASIC11.24□□□□□ -0.61
Ccdc180J3QNE4 Api5-ps-201ENSMUST00000206607 577 ntBASIC11.24□□□□□ -0.61
Ccdc180J3QNE4 AC102287.1-201ENSMUST00000211412 454 ntBASIC11.24□□□□□ -0.61
Ccdc180J3QNE4 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc180J3QNE4 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc180J3QNE4 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc180J3QNE4 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc180J3QNE4 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Ccdc180J3QNE4 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc180J3QNE4 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc180J3QNE4 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc180J3QNE4 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc180J3QNE4 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC11.24□□□□□ -0.61
Ccdc180J3QNE4 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Ccdc180J3QNE4 Gm13193-201ENSMUST00000117275 225 ntBASIC11.24□□□□□ -0.61
Ccdc180J3QNE4 Gm13245-201ENSMUST00000119646 260 ntBASIC11.24□□□□□ -0.61
Ccdc180J3QNE4 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc180J3QNE4 Gm22867-201ENSMUST00000157499 109 ntBASIC11.24□□□□□ -0.61
Ccdc180J3QNE4 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Ccdc180J3QNE4 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Ccdc180J3QNE4 Gm42961-201ENSMUST00000202023 181 ntBASIC11.24□□□□□ -0.61
Ccdc180J3QNE4 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc180J3QNE4 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 Gm44416-201ENSMUST00000204055 2066 ntBASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 AC167013.5-201ENSMUST00000227597 2947 ntBASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 Gm38181-201ENSMUST00000181357 720 ntBASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc180J3QNE4 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc180J3QNE4 AC139758.3-201ENSMUST00000226853 2704 ntBASIC11.22□□□□□ -0.61
Ccdc180J3QNE4 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc180J3QNE4 AC122305.1-201ENSMUST00000214803 3921 ntBASIC11.22□□□□□ -0.61
Ccdc180J3QNE4 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc180J3QNE4 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc180J3QNE4 Gm25439-201ENSMUST00000158280 131 ntBASIC11.22□□□□□ -0.61
Ccdc180J3QNE4 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc180J3QNE4 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC11.22□□□□□ -0.61
Ccdc180J3QNE4 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Ccdc180J3QNE4 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Ccdc180J3QNE4 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc180J3QNE4 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC11.22□□□□□ -0.61
Ccdc180J3QNE4 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc180J3QNE4 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc180J3QNE4 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc180J3QNE4 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc180J3QNE4 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc180J3QNE4 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc180J3QNE4 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc180J3QNE4 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc180J3QNE4 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ccdc180J3QNE4 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms