Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 AC022682.2-202ENSMUST00000224394 3943 ntBASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Gm11908-201ENSMUST00000117755 347 ntBASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Gm23740-201ENSMUST00000157385 100 ntBASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Gm8185-201ENSMUST00000160999 669 ntBASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Ighv10-4-201ENSMUST00000193702 299 ntBASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Gm37774-201ENSMUST00000194401 245 ntBASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Gm22220-201ENSMUST00000082671 149 ntBASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Vps8-204ENSMUST00000117598 4935 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Gm42490-201ENSMUST00000198595 2064 ntBASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Iars-201ENSMUST00000047363 4396 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Wipf3-206ENSMUST00000172046 4204 ntAPPRIS P4 TSL 5 BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Gatad2b-205ENSMUST00000199754 7438 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Gm25179-201ENSMUST00000122632 128 ntBASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Gm36935-201ENSMUST00000192526 292 ntBASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Vps8-206ENSMUST00000118923 4838 ntTSL 5 BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Ebf2-201ENSMUST00000022637 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Setd7-201ENSMUST00000037141 7411 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Gm12267-201ENSMUST00000121609 761 ntBASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Gm7316-201ENSMUST00000165395 445 ntBASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Gm21399-201ENSMUST00000180210 597 ntBASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Gm37758-201ENSMUST00000194275 629 ntBASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Gm6366-201ENSMUST00000198766 826 ntBASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Gm5119-201ENSMUST00000215858 634 ntBASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Gm44046-201ENSMUST00000203145 2678 ntBASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Gm26005-201ENSMUST00000158802 134 ntBASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Gm27541-201ENSMUST00000184078 122 ntBASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Gm8458-201ENSMUST00000196658 819 ntBASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Gm43408-201ENSMUST00000198263 440 ntBASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 CT025689.2-201ENSMUST00000224979 429 ntBASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 CT573086.3-201ENSMUST00000228762 594 ntBASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Gm13973-201ENSMUST00000121371 894 ntBASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Zakit-201ENSMUST00000157677 308 ntBASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Gm44776-201ENSMUST00000207212 381 ntBASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC5.91□□□□□ -1.46
Col6a3E9PWQ3 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC5.91□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms