Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm15930-201ENSMUST00000156603 2037 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a4A2AX52 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm14745-201ENSMUST00000118480 1096 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm13579-201ENSMUST00000118519 517 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm14300-201ENSMUST00000120800 946 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm26381-201ENSMUST00000174895 92 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Mir199b-201ENSMUST00000175066 110 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm28943-201ENSMUST00000186187 615 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm28736-201ENSMUST00000186257 615 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm29401-201ENSMUST00000186690 615 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm29178-204ENSMUST00000186784 615 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm28589-201ENSMUST00000186991 615 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm28936-201ENSMUST00000187153 615 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm29121-201ENSMUST00000187611 615 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm28243-201ENSMUST00000187801 615 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm28844-202ENSMUST00000187977 615 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm29058-201ENSMUST00000189510 615 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm29624-201ENSMUST00000190018 615 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm28780-201ENSMUST00000190223 615 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm28969-211ENSMUST00000190992 615 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm28990-207ENSMUST00000191219 615 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm36468-201ENSMUST00000192119 615 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm31572-201ENSMUST00000193341 615 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm30175-201ENSMUST00000194173 615 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm30858-201ENSMUST00000195516 615 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm10095-201ENSMUST00000222765 483 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col6a4A2AX52 n-R5s56-201ENSMUST00000082521 105 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col6a4A2AX52 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm9877-201ENSMUST00000064271 2627 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.19□□□□□ -1.58
Col6a4A2AX52 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Gm14796-201ENSMUST00000121216 959 ntBASIC5.19□□□□□ -1.58
Col6a4A2AX52 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Gm23806-201ENSMUST00000175157 109 ntBASIC5.19□□□□□ -1.58
Col6a4A2AX52 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Gm8506-201ENSMUST00000186661 829 ntBASIC5.19□□□□□ -1.58
Col6a4A2AX52 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.19□□□□□ -1.58
Col6a4A2AX52 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC5.19□□□□□ -1.58
Col6a4A2AX52 CT030175.1-201ENSMUST00000220822 408 ntBASIC5.19□□□□□ -1.58
Col6a4A2AX52 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.19□□□□□ -1.58
Col6a4A2AX52 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Col6a4A2AX52 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Gm23502-201ENSMUST00000083902 145 ntBASIC5.19□□□□□ -1.58
Col6a4A2AX52 Gm4073-201ENSMUST00000176792 3500 ntBASIC5.19□□□□□ -1.58
Col6a4A2AX52 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.19□□□□□ -1.58
Col6a4A2AX52 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col6a4A2AX52 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a4A2AX52 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a4A2AX52 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Col6a4A2AX52 Lipe-203ENSMUST00000105177 1251 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms