Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
Trim3Q9R1R2 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gm18878-201ENSMUST00000223071 1443 ntBASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gm18066-201ENSMUST00000210904 1774 ntBASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gm37186-201ENSMUST00000195629 2861 ntBASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gm12937-201ENSMUST00000118333 448 ntBASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Sms-ps-201ENSMUST00000121773 1101 ntBASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gm11609-201ENSMUST00000121926 793 ntBASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gm22223-201ENSMUST00000157360 125 ntBASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gm25904-201ENSMUST00000158491 143 ntBASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gm22094-201ENSMUST00000158976 117 ntBASIC5.91□□□□□ -1.46
Trim3Q9R1R2 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gm22690-201ENSMUST00000175054 110 ntBASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gm9517-201ENSMUST00000195021 874 ntBASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gm1969-201ENSMUST00000198125 1220 ntBASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gm4548-201ENSMUST00000208487 509 ntBASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gm37127-201ENSMUST00000192924 3036 ntBASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gm5949-201ENSMUST00000213468 1421 ntBASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Trim3Q9R1R2 Gm37342-201ENSMUST00000194588 4965 ntBASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Trim3Q9R1R2 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Gm11799-201ENSMUST00000116110 460 ntBASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Gm8250-201ENSMUST00000117398 774 ntBASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Gm15502-201ENSMUST00000121449 208 ntBASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC5.9□□□□□ -1.46
Trim3Q9R1R2 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Gm26353-201ENSMUST00000158224 255 ntBASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Gm3344-201ENSMUST00000169610 603 ntBASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Gm7554-201ENSMUST00000202282 574 ntBASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Gm18600-201ENSMUST00000207205 505 ntBASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trim3Q9R1R2 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trim3Q9R1R2 AC154757.2-201ENSMUST00000228885 743 ntBASIC5.9□□□□□ -1.46
Trim3Q9R1R2 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms