Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.03□□□□□ -1.44
Lima1Q9ERG0 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lima1Q9ERG0 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Gm25564-201ENSMUST00000104604 132 ntBASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Gm9311-201ENSMUST00000118042 1269 ntBASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Gm12101-201ENSMUST00000121590 390 ntBASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC6.03□□□□□ -1.44
Lima1Q9ERG0 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Gm29605-201ENSMUST00000190800 292 ntBASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Gm4856-201ENSMUST00000192696 1091 ntBASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Ighv1-73-201ENSMUST00000197435 352 ntBASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Gm19088-201ENSMUST00000198800 566 ntBASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Gm9321-201ENSMUST00000221179 778 ntBASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC6.03□□□□□ -1.44
Lima1Q9ERG0 AC124489.3-201ENSMUST00000224037 278 ntBASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Gpr87-201ENSMUST00000056898 1080 ntBASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Gm15732-201ENSMUST00000079794 480 ntBASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Gm10258-201ENSMUST00000091270 2123 ntBASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Olfr687-201ENSMUST00000098154 938 ntBASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Lima1Q9ERG0 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Gm9314-201ENSMUST00000199881 1528 ntBASIC6.03□□□□□ -1.44
Lima1Q9ERG0 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lima1Q9ERG0 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6.03□□□□□ -1.44
Lima1Q9ERG0 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
Lima1Q9ERG0 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 AC158595.1-201ENSMUST00000217989 1435 ntBASIC6.02□□□□□ -1.45
Lima1Q9ERG0 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gm22267-201ENSMUST00000104008 131 ntBASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gm24989-201ENSMUST00000104461 88 ntBASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gm14998-201ENSMUST00000120502 495 ntBASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gm11962-201ENSMUST00000145746 255 ntBASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gm23674-201ENSMUST00000157473 131 ntBASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gm9556-201ENSMUST00000182938 940 ntBASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gm27853-201ENSMUST00000184176 250 ntBASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gm37770-201ENSMUST00000192855 772 ntBASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gm37883-201ENSMUST00000194970 725 ntBASIC6.02□□□□□ -1.45
Lima1Q9ERG0 AC122844.1-201ENSMUST00000195971 107 ntBASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gm21048-201ENSMUST00000202470 1166 ntBASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Lima1Q9ERG0 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.01□□□□□ -1.45
Lima1Q9ERG0 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms