Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Cdc40Q9DC48 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Cdc40Q9DC48 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Cdc40Q9DC48 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Cdc40Q9DC48 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC5.84□□□□□ -1.48
Cdc40Q9DC48 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.48
Cdc40Q9DC48 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Cdc40Q9DC48 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
Cdc40Q9DC48 Gm8822-201ENSMUST00000118948 2347 ntBASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Gm37864-201ENSMUST00000195308 3075 ntBASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Gm43502-201ENSMUST00000200263 2596 ntBASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Gm44677-201ENSMUST00000209151 3739 ntBASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Gm12244-201ENSMUST00000119500 291 ntBASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Gm12262-201ENSMUST00000119915 305 ntBASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Gm16511-201ENSMUST00000120019 564 ntBASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Gm6446-201ENSMUST00000120604 818 ntBASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Gm11879-201ENSMUST00000121885 702 ntBASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Rps29-ps-201ENSMUST00000122083 172 ntBASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Gm25962-201ENSMUST00000157173 168 ntBASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Gm24735-201ENSMUST00000158859 118 ntBASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC5.83□□□□□ -1.48
Cdc40Q9DC48 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Gm37376-201ENSMUST00000192176 453 ntBASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Gm37475-201ENSMUST00000193107 1015 ntBASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Igkv12-67-201ENSMUST00000197806 354 ntBASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Gm44770-201ENSMUST00000205395 1264 ntBASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Gm2996-201ENSMUST00000211398 537 ntBASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC5.83□□□□□ -1.48
Cdc40Q9DC48 AC073562.1-201ENSMUST00000222117 401 ntBASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Gm18716-201ENSMUST00000204507 1603 ntBASIC5.83□□□□□ -1.48
Cdc40Q9DC48 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Cdc40Q9DC48 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Gm24989-201ENSMUST00000104461 88 ntBASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Gm14925-201ENSMUST00000120611 438 ntBASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Gm14054-201ENSMUST00000120744 704 ntBASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Gm7212-201ENSMUST00000120817 348 ntBASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC5.82□□□□□ -1.48
Cdc40Q9DC48 n-R5s48-201ENSMUST00000122482 110 ntBASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Gm23896-201ENSMUST00000158109 130 ntBASIC5.82□□□□□ -1.48
Cdc40Q9DC48 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Scgb2b33-201ENSMUST00000187413 334 ntBASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Gm29072-201ENSMUST00000191149 678 ntBASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Gm2926-201ENSMUST00000205625 239 ntBASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Gm44984-201ENSMUST00000207802 394 ntBASIC5.82□□□□□ -1.48
Cdc40Q9DC48 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 Gm18591-201ENSMUST00000220568 763 ntBASIC5.82□□□□□ -1.48
Cdc40Q9DC48 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC5.82□□□□□ -1.48
Cdc40Q9DC48 AC105950.1-201ENSMUST00000222637 408 ntBASIC5.82□□□□□ -1.48
Cdc40Q9DC48 AC129597.1-201ENSMUST00000223046 1234 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms