Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC6.21□□□□□ -1.42
Msh4Q99MT2 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC6.21□□□□□ -1.42
Msh4Q99MT2 Gm43655-201ENSMUST00000197367 222 ntBASIC6.21□□□□□ -1.42
Msh4Q99MT2 Gm17908-201ENSMUST00000205552 1256 ntBASIC6.21□□□□□ -1.42
Msh4Q99MT2 Gm19201-201ENSMUST00000210127 778 ntBASIC6.21□□□□□ -1.42
Msh4Q99MT2 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Msh4Q99MT2 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC6.21□□□□□ -1.42
Msh4Q99MT2 Gm7413-201ENSMUST00000219498 462 ntBASIC6.21□□□□□ -1.42
Msh4Q99MT2 AC211878.6-201ENSMUST00000221896 358 ntBASIC6.21□□□□□ -1.42
Msh4Q99MT2 Gm18620-201ENSMUST00000222295 324 ntBASIC6.21□□□□□ -1.42
Msh4Q99MT2 Gm19154-201ENSMUST00000223330 940 ntBASIC6.21□□□□□ -1.42
Msh4Q99MT2 AC133203.1-201ENSMUST00000228241 301 ntBASIC6.21□□□□□ -1.42
Msh4Q99MT2 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Msh4Q99MT2 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Msh4Q99MT2 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Msh4Q99MT2 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
Msh4Q99MT2 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC6.21□□□□□ -1.42
Msh4Q99MT2 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.21□□□□□ -1.42
Msh4Q99MT2 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Msh4Q99MT2 Olfr687-201ENSMUST00000098154 938 ntBASIC6.21□□□□□ -1.42
Msh4Q99MT2 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Msh4Q99MT2 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Msh4Q99MT2 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Msh4Q99MT2 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Msh4Q99MT2 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Msh4Q99MT2 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Msh4Q99MT2 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Msh4Q99MT2 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Msh4Q99MT2 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm18879-201ENSMUST00000221187 1537 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 AC158981.2-201ENSMUST00000227565 1537 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm37470-201ENSMUST00000193378 2798 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Robo2-210ENSMUST00000226478 8059 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm26422-201ENSMUST00000104276 132 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm9427-201ENSMUST00000116187 651 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm5387-201ENSMUST00000119776 857 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm14900-201ENSMUST00000120304 733 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm12369-201ENSMUST00000121343 942 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm14038-201ENSMUST00000121500 807 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm12451-201ENSMUST00000121636 633 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm13669-201ENSMUST00000122366 457 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm3757-201ENSMUST00000125878 675 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm11545-201ENSMUST00000146507 375 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm22223-201ENSMUST00000157360 125 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm23674-201ENSMUST00000157473 131 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Msh4Q99MT2 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm9274-201ENSMUST00000182505 984 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm27970-201ENSMUST00000184854 407 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm8506-201ENSMUST00000186661 829 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm18447-201ENSMUST00000187501 307 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm28492-201ENSMUST00000190899 1019 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm6366-201ENSMUST00000198766 826 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Ighv1-83-201ENSMUST00000199643 351 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm18193-201ENSMUST00000210017 772 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm17997-201ENSMUST00000211801 840 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC6.2□□□□□ -1.42
Msh4Q99MT2 AC164295.1-201ENSMUST00000224861 186 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Msh4Q99MT2 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm23238-201ENSMUST00000083007 164 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm10205-201ENSMUST00000087431 234 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Gm42455-201ENSMUST00000199761 2736 ntBASIC6.2□□□□□ -1.42
Msh4Q99MT2 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Msh4Q99MT2 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms