Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm37894-201ENSMUST00000195416 2599 ntBASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm25564-201ENSMUST00000104604 132 ntBASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm16418-201ENSMUST00000118577 171 ntBASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm13626-201ENSMUST00000119435 402 ntBASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm12189-201ENSMUST00000119779 912 ntBASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm7212-201ENSMUST00000120817 348 ntBASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm14515-201ENSMUST00000121327 216 ntBASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm12399-201ENSMUST00000121475 446 ntBASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm23674-201ENSMUST00000157473 131 ntBASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm23027-201ENSMUST00000158771 158 ntBASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm23343-201ENSMUST00000158964 143 ntBASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm29605-201ENSMUST00000190800 292 ntBASIC5.97□□□□□ -1.45
Lsm1Q8VC85 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm37439-201ENSMUST00000193150 856 ntBASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm20128-201ENSMUST00000196189 417 ntBASIC5.97□□□□□ -1.45
Lsm1Q8VC85 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm19088-201ENSMUST00000198800 566 ntBASIC5.97□□□□□ -1.45
Lsm1Q8VC85 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 AC122459.3-201ENSMUST00000228508 1042 ntBASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm14988-201ENSMUST00000117224 1548 ntBASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm4927-201ENSMUST00000219548 1318 ntBASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lsm1Q8VC85 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Lsm1Q8VC85 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Lsm1Q8VC85 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Lsm1Q8VC85 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Lsm1Q8VC85 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Lsm1Q8VC85 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Lsm1Q8VC85 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Lsm1Q8VC85 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Lsm1Q8VC85 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Lsm1Q8VC85 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Lsm1Q8VC85 Gm19368-201ENSMUST00000221258 4424 ntBASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Gm23979-201ENSMUST00000104071 128 ntBASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Gm16073-201ENSMUST00000116032 517 ntBASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Gm12713-201ENSMUST00000118404 764 ntBASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Gm14098-201ENSMUST00000119295 623 ntBASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Gm8312-201ENSMUST00000119380 618 ntBASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Mir6987-201ENSMUST00000184789 73 ntBASIC5.96□□□□□ -1.46
Lsm1Q8VC85 Gm19480-201ENSMUST00000185547 667 ntBASIC5.96□□□□□ -1.46
Lsm1Q8VC85 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms