Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm25374-201ENSMUST00000158158 101 ntBASIC6.23□□□□□ -1.41
Vps39Q8R5L3 Gm22548-201ENSMUST00000174899 78 ntBASIC6.23□□□□□ -1.41
Vps39Q8R5L3 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Vps39Q8R5L3 Gm29605-201ENSMUST00000190800 292 ntBASIC6.23□□□□□ -1.41
Vps39Q8R5L3 Gm37871-201ENSMUST00000194973 688 ntBASIC6.23□□□□□ -1.41
Vps39Q8R5L3 Gm7626-201ENSMUST00000195801 353 ntBASIC6.23□□□□□ -1.41
Vps39Q8R5L3 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC6.23□□□□□ -1.41
Vps39Q8R5L3 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Vps39Q8R5L3 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Vps39Q8R5L3 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.23□□□□□ -1.41
Vps39Q8R5L3 Gm44837-201ENSMUST00000206863 717 ntBASIC6.23□□□□□ -1.41
Vps39Q8R5L3 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Vps39Q8R5L3 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.23□□□□□ -1.41
Vps39Q8R5L3 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC6.23□□□□□ -1.41
Vps39Q8R5L3 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC6.23□□□□□ -1.41
Vps39Q8R5L3 AC122459.3-201ENSMUST00000228508 1042 ntBASIC6.23□□□□□ -1.41
Vps39Q8R5L3 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Vps39Q8R5L3 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Vps39Q8R5L3 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Vps39Q8R5L3 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Vps39Q8R5L3 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Vps39Q8R5L3 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Vps39Q8R5L3 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Vps39Q8R5L3 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.23□□□□□ -1.41
Vps39Q8R5L3 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gm38257-201ENSMUST00000195881 2761 ntBASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gm37435-201ENSMUST00000192078 3947 ntBASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gm23979-201ENSMUST00000104071 128 ntBASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gm11107-201ENSMUST00000165414 505 ntBASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gm5871-201ENSMUST00000176461 718 ntBASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gm21839-201ENSMUST00000179536 378 ntBASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gm28455-201ENSMUST00000189105 1290 ntBASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gm37838-201ENSMUST00000194464 312 ntBASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gm22711-202ENSMUST00000197029 135 ntBASIC6.22□□□□□ -1.41
Vps39Q8R5L3 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gm43063-201ENSMUST00000198198 1081 ntBASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gm19088-201ENSMUST00000198800 566 ntBASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gm19764-201ENSMUST00000203630 649 ntBASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gm44075-201ENSMUST00000204208 216 ntBASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gm33312-201ENSMUST00000222443 332 ntBASIC6.22□□□□□ -1.41
Vps39Q8R5L3 AL837512.1-201ENSMUST00000223914 1073 ntBASIC6.22□□□□□ -1.41
Vps39Q8R5L3 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 n-R5s41-201ENSMUST00000083025 119 ntBASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gm24695-201ENSMUST00000083877 83 ntBASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 AC121870.1-201ENSMUST00000216279 4879 ntBASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC6.22□□□□□ -1.41
Vps39Q8R5L3 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Vps39Q8R5L3 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Vps39Q8R5L3 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC6.21□□□□□ -1.41
Vps39Q8R5L3 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Vps39Q8R5L3 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Vps39Q8R5L3 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Vps39Q8R5L3 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.21□□□□□ -1.41
Vps39Q8R5L3 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
Vps39Q8R5L3 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.21□□□□□ -1.42
Vps39Q8R5L3 Ap5m1-208ENSMUST00000228238 3514 ntBASIC6.21□□□□□ -1.42
Vps39Q8R5L3 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Vps39Q8R5L3 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Vps39Q8R5L3 Gm14382-201ENSMUST00000117374 437 ntBASIC6.21□□□□□ -1.42
Vps39Q8R5L3 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.21□□□□□ -1.42
Vps39Q8R5L3 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Vps39Q8R5L3 Gm13818-201ENSMUST00000119441 511 ntBASIC6.21□□□□□ -1.42
Vps39Q8R5L3 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.21□□□□□ -1.42
Vps39Q8R5L3 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 380.8 ms