Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm9890-201ENSMUST00000171867 537 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm23164-201ENSMUST00000175084 111 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm27152-201ENSMUST00000183828 99 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Mir7033-201ENSMUST00000184259 81 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm36997-201ENSMUST00000195090 707 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm43476-201ENSMUST00000197873 405 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm5711-201ENSMUST00000197896 421 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm42464-202ENSMUST00000198111 774 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm8891-201ENSMUST00000198546 832 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm4859-201ENSMUST00000199625 787 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm18781-201ENSMUST00000211252 924 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Clrn1Q8K445 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Clrn1Q8K445 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Olfr923-204ENSMUST00000219798 1068 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm31711-201ENSMUST00000220687 196 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm32300-201ENSMUST00000221735 515 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 AC091237.1-201ENSMUST00000224911 637 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 CT571256.1-201ENSMUST00000226045 585 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 AC115735.5-201ENSMUST00000228386 397 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 AC133654.1-201ENSMUST00000228411 672 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm6863-201ENSMUST00000052882 636 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm5436-201ENSMUST00000058103 643 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Olfr815-201ENSMUST00000071557 951 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm42930-201ENSMUST00000200872 3260 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm37283-201ENSMUST00000193111 1571 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Gm3555-201ENSMUST00000160287 1395 ntBASIC6.31□□□□□ -1.4
Clrn1Q8K445 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Clrn1Q8K445 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Clrn1Q8K445 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Clrn1Q8K445 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Clrn1Q8K445 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.3□□□□□ -1.4
Clrn1Q8K445 Gm37107-201ENSMUST00000195326 2552 ntBASIC6.3□□□□□ -1.4
Clrn1Q8K445 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Clrn1Q8K445 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Clrn1Q8K445 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Clrn1Q8K445 Gm44620-201ENSMUST00000209183 2887 ntBASIC6.3□□□□□ -1.4
Clrn1Q8K445 AC139941.2-201ENSMUST00000221565 1824 ntBASIC6.3□□□□□ -1.4
Clrn1Q8K445 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC6.3□□□□□ -1.4
Clrn1Q8K445 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC6.3□□□□□ -1.4
Clrn1Q8K445 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Clrn1Q8K445 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Clrn1Q8K445 Gm2178-201ENSMUST00000104927 357 ntBASIC6.3□□□□□ -1.4
Clrn1Q8K445 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC6.3□□□□□ -1.4
Clrn1Q8K445 Gm14576-201ENSMUST00000118073 1111 ntBASIC6.3□□□□□ -1.4
Clrn1Q8K445 Gm13222-201ENSMUST00000119638 138 ntBASIC6.3□□□□□ -1.4
Clrn1Q8K445 Gm9001-201ENSMUST00000121642 399 ntBASIC6.3□□□□□ -1.4
Clrn1Q8K445 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Clrn1Q8K445 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC6.3□□□□□ -1.4
Clrn1Q8K445 Gm26046-201ENSMUST00000157312 166 ntBASIC6.3□□□□□ -1.4
Clrn1Q8K445 Gm25556-201ENSMUST00000158077 144 ntBASIC6.3□□□□□ -1.4
Clrn1Q8K445 Gm6434-201ENSMUST00000163316 372 ntBASIC6.3□□□□□ -1.4
Clrn1Q8K445 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Clrn1Q8K445 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC6.3□□□□□ -1.4
Clrn1Q8K445 Gm19200-201ENSMUST00000182579 1001 ntBASIC6.3□□□□□ -1.4
Clrn1Q8K445 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC6.3□□□□□ -1.4
Clrn1Q8K445 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC6.3□□□□□ -1.4
Clrn1Q8K445 Gm29525-201ENSMUST00000189844 699 ntBASIC6.3□□□□□ -1.4
Clrn1Q8K445 Gm7867-201ENSMUST00000189856 546 ntBASIC6.3□□□□□ -1.4
Clrn1Q8K445 Gm29523-201ENSMUST00000191415 699 ntBASIC6.3□□□□□ -1.4
Clrn1Q8K445 Gm18843-201ENSMUST00000194982 719 ntBASIC6.3□□□□□ -1.4
Clrn1Q8K445 Gm43689-201ENSMUST00000195951 427 ntBASIC6.3□□□□□ -1.4
Clrn1Q8K445 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC6.3□□□□□ -1.4
Clrn1Q8K445 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC6.3□□□□□ -1.4
Clrn1Q8K445 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC6.3□□□□□ -1.4
Clrn1Q8K445 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.3□□□□□ -1.4
Clrn1Q8K445 Gm4574-201ENSMUST00000207804 542 ntBASIC6.3□□□□□ -1.4
Clrn1Q8K445 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Clrn1Q8K445 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC6.3□□□□□ -1.4
Clrn1Q8K445 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC6.3□□□□□ -1.4
Clrn1Q8K445 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC6.3□□□□□ -1.4
Clrn1Q8K445 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC6.3□□□□□ -1.4
Clrn1Q8K445 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 126.8 ms