Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 Gm7613-201ENSMUST00000139070 487 ntBASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 Mir1945-201ENSMUST00000157919 78 ntBASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 Mir6908-201ENSMUST00000184056 63 ntBASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 Gm43467-201ENSMUST00000197441 437 ntBASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 Gm42776-201ENSMUST00000198031 406 ntBASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 Gm45008-201ENSMUST00000206420 493 ntBASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 Gm18805-201ENSMUST00000206872 655 ntBASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 CT030238.4-202ENSMUST00000226143 745 ntBASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 Gm42998-201ENSMUST00000197053 2371 ntBASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 Gm4994-201ENSMUST00000118379 2187 ntBASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Ccdc28aQ8CEI3 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm26289-201ENSMUST00000104169 131 ntBASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm25916-201ENSMUST00000104263 131 ntBASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm8312-201ENSMUST00000119380 618 ntBASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm11990-201ENSMUST00000121505 897 ntBASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm24422-201ENSMUST00000157800 119 ntBASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Mir5107-201ENSMUST00000175586 88 ntBASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm5430-201ENSMUST00000182525 915 ntBASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm28455-201ENSMUST00000189105 1290 ntBASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm43354-201ENSMUST00000196862 346 ntBASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm44108-201ENSMUST00000203525 422 ntBASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm18600-201ENSMUST00000207205 505 ntBASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm43788-201ENSMUST00000201539 2417 ntBASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC6.36□□□□□ -1.39
Ccdc28aQ8CEI3 Gm2080-201ENSMUST00000211299 1573 ntBASIC6.35□□□□□ -1.39
Ccdc28aQ8CEI3 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc28aQ8CEI3 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc28aQ8CEI3 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc28aQ8CEI3 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.35□□□□□ -1.39
Ccdc28aQ8CEI3 Gm37248-201ENSMUST00000193576 3174 ntBASIC6.35□□□□□ -1.39
Ccdc28aQ8CEI3 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc28aQ8CEI3 Gm38036-201ENSMUST00000194586 3564 ntBASIC6.35□□□□□ -1.39
Ccdc28aQ8CEI3 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc28aQ8CEI3 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Ccdc28aQ8CEI3 Gm45311-201ENSMUST00000211086 1330 ntBASIC6.35□□□□□ -1.39
Ccdc28aQ8CEI3 AC164092.3-201ENSMUST00000216970 1323 ntBASIC6.35□□□□□ -1.39
Ccdc28aQ8CEI3 AC159624.1-201ENSMUST00000217762 1344 ntBASIC6.35□□□□□ -1.39
Ccdc28aQ8CEI3 Mir688-201ENSMUST00000102055 75 ntBASIC6.35□□□□□ -1.39
Ccdc28aQ8CEI3 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc28aQ8CEI3 Gm16073-201ENSMUST00000116032 517 ntBASIC6.35□□□□□ -1.39
Ccdc28aQ8CEI3 Gm12535-201ENSMUST00000121025 484 ntBASIC6.35□□□□□ -1.39
Ccdc28aQ8CEI3 Gm13593-201ENSMUST00000121329 692 ntBASIC6.35□□□□□ -1.39
Ccdc28aQ8CEI3 Gm15696-201ENSMUST00000121730 445 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms