Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm13207-201ENSMUST00000119862 773 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm12482-201ENSMUST00000120435 630 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm6061-201ENSMUST00000175860 492 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm28943-201ENSMUST00000186187 615 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm28736-201ENSMUST00000186257 615 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm29401-201ENSMUST00000186690 615 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm29178-204ENSMUST00000186784 615 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm28589-201ENSMUST00000186991 615 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm28936-201ENSMUST00000187153 615 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm29121-201ENSMUST00000187611 615 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm28243-201ENSMUST00000187801 615 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm28844-202ENSMUST00000187977 615 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm29058-201ENSMUST00000189510 615 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm29624-201ENSMUST00000190018 615 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm28780-201ENSMUST00000190223 615 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm28969-211ENSMUST00000190992 615 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm28990-207ENSMUST00000191219 615 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm36468-201ENSMUST00000192119 615 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm31572-201ENSMUST00000193341 615 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm30175-201ENSMUST00000194173 615 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm30858-201ENSMUST00000195516 615 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm8454-201ENSMUST00000196980 811 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm7780-201ENSMUST00000214787 406 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Gm7557-201ENSMUST00000221935 865 ntBASIC5.57□□□□□ -1.52
Col6a6Q8C6K9 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Gm14762-201ENSMUST00000105109 1771 ntBASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Gm37238-201ENSMUST00000195552 2390 ntBASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Gm43627-201ENSMUST00000197119 2299 ntBASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 AC129085.2-201ENSMUST00000223763 2800 ntBASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Gm43062-201ENSMUST00000196302 1319 ntBASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Gm24230-201ENSMUST00000104313 129 ntBASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Gm13930-201ENSMUST00000118569 368 ntBASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Gm22492-201ENSMUST00000157192 297 ntBASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Gm28640-201ENSMUST00000190918 550 ntBASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Gm18422-201ENSMUST00000203663 1032 ntBASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Gm46192-201ENSMUST00000217894 326 ntBASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 AC153937.1-201ENSMUST00000218734 412 ntBASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 CT025667.1-201ENSMUST00000225872 382 ntBASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Gm10064-201ENSMUST00000071235 399 ntBASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Mir337-201ENSMUST00000083592 97 ntBASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Gm19093-201ENSMUST00000210671 1454 ntBASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col6a6Q8C6K9 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Gm11894-201ENSMUST00000121579 328 ntBASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Gm45596-201ENSMUST00000209279 434 ntBASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Col6a6Q8C6K9 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 119 ms