Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Gm28651-202ENSMUST00000227968 2693 ntBASIC8.16□□□□□ -1.1
Trim47Q8C0E3 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm43618-201ENSMUST00000197392 3451 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC8.15□□□□□ -1.1
Trim47Q8C0E3 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm2762-207ENSMUST00000202739 2665 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm40778-201ENSMUST00000217825 1344 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm12889-201ENSMUST00000118684 241 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm11512-201ENSMUST00000119669 663 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm13367-201ENSMUST00000119955 796 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm15390-201ENSMUST00000120323 738 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm6591-201ENSMUST00000121063 434 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm8032-201ENSMUST00000171009 574 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm26179-201ENSMUST00000177723 132 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm21909-201ENSMUST00000178260 439 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm16531-201ENSMUST00000180658 967 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm1972-201ENSMUST00000181606 964 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm28596-201ENSMUST00000185870 696 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm32295-201ENSMUST00000192558 696 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm7496-201ENSMUST00000192573 1034 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm31260-201ENSMUST00000193478 696 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm37260-201ENSMUST00000193748 1251 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm37209-201ENSMUST00000194109 1276 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm37526-201ENSMUST00000194640 619 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm43384-201ENSMUST00000200569 637 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Trim47Q8C0E3 AC109212.1-201ENSMUST00000215561 427 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 AC164550.1-201ENSMUST00000217821 1066 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 AC127224.1-201ENSMUST00000218094 453 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim47Q8C0E3 AC117949.1-201ENSMUST00000225547 419 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Anxa13-202ENSMUST00000227274 1201 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Gm25404-201ENSMUST00000082970 107 ntBASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim47Q8C0E3 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim47Q8C0E3 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim47Q8C0E3 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim47Q8C0E3 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim47Q8C0E3 Gm37403-201ENSMUST00000193775 3521 ntBASIC8.15□□□□□ -1.11
Trim47Q8C0E3 Gm8878-201ENSMUST00000173552 1725 ntBASIC8.15□□□□□ -1.11
Trim47Q8C0E3 Gm6866-201ENSMUST00000188559 2549 ntBASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Gm10259-201ENSMUST00000091289 1590 ntBASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Gm18701-201ENSMUST00000188281 1536 ntBASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Gm13310-201ENSMUST00000120962 1381 ntBASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Gm10744-201ENSMUST00000220184 2706 ntBASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Gm25757-201ENSMUST00000103986 123 ntBASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Gm22438-201ENSMUST00000104049 132 ntBASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Gm17170-201ENSMUST00000112785 316 ntBASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Gm12924-201ENSMUST00000121747 318 ntBASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Trim47Q8C0E3 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms