Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Thsd1-203ENSMUST00000162447 3273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 Cdh8-204ENSMUST00000142129 2711 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm43282-201ENSMUST00000201848 2157 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 Baz2a-208ENSMUST00000220049 8443 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm4954-201ENSMUST00000135069 1601 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Trim35Q8C006 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Trim35Q8C006 Sorbs1-212ENSMUST00000225148 2379 ntAPPRIS ALT2 BASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm29170-201ENSMUST00000190224 3666 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Trim35Q8C006 Tcf7l2-212ENSMUST00000111659 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 Nup210l-201ENSMUST00000029548 5681 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
Trim35Q8C006 Etl4-205ENSMUST00000114607 3055 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Trim35Q8C006 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Trim35Q8C006 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 Rgs8-205ENSMUST00000111815 765 ntTSL 5 BASIC9.13□□□□□ -0.95
Trim35Q8C006 Mrps18b-202ENSMUST00000113782 803 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm14750-201ENSMUST00000118262 516 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm15369-201ENSMUST00000119681 394 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm11556-201ENSMUST00000120751 288 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm14673-201ENSMUST00000121973 746 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm25319-201ENSMUST00000122552 325 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm12679-201ENSMUST00000123899 636 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm13767-201ENSMUST00000124074 876 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm13832-201ENSMUST00000146546 414 ntTSL 2 BASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm16329-201ENSMUST00000148174 371 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm23703-201ENSMUST00000158839 143 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 4930519F09Rik-202ENSMUST00000163084 1111 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 BC048671-202ENSMUST00000167550 890 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC9.13□□□□□ -0.95
Trim35Q8C006 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Trim35Q8C006 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Trim35Q8C006 Mir6909-201ENSMUST00000184212 62 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm29323-201ENSMUST00000189792 332 ntTSL 3 BASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm18765-201ENSMUST00000203166 660 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm45189-201ENSMUST00000208567 363 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm18857-201ENSMUST00000210421 901 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 AC134900.1-201ENSMUST00000216575 266 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm18103-201ENSMUST00000216621 779 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm8863-201ENSMUST00000216630 926 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 AC155929.2-201ENSMUST00000218541 307 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm8158-201ENSMUST00000219220 465 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm8249-201ENSMUST00000219225 465 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm8112-201ENSMUST00000219637 465 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 Cd2-201ENSMUST00000029456 1153 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 Scp2-ps2-201ENSMUST00000072166 478 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm6304-201ENSMUST00000096579 447 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 Mettl18-201ENSMUST00000045694 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm38348-201ENSMUST00000191718 2273 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 Lcp1-202ENSMUST00000124499 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 A530064D06Rik-201ENSMUST00000027764 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 Sfmbt1-202ENSMUST00000112184 2936 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Trim35Q8C006 Tbx19-201ENSMUST00000027859 2660 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 AC164437.4-202ENSMUST00000228794 2413 ntBASIC9.13□□□□□ -0.95
Trim35Q8C006 Il12b-202ENSMUST00000170513 1944 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Trim35Q8C006 A930037H05Rik-203ENSMUST00000207446 4320 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm15477-202ENSMUST00000143945 2351 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 Chrna5-201ENSMUST00000093844 1877 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Trim35Q8C006 A430033K04Rik-202ENSMUST00000069862 3038 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 Smok3b-201ENSMUST00000100537 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trim35Q8C006 Gpbp1-201ENSMUST00000047627 3694 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm9105-201ENSMUST00000120160 1398 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Cd8a-202ENSMUST00000172321 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim35Q8C006 Net1-202ENSMUST00000099946 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm42440-201ENSMUST00000197906 2284 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Zp2-201ENSMUST00000033207 2221 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim35Q8C006 Asph-206ENSMUST00000103004 1762 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trim35Q8C006 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
Trim35Q8C006 Mavs-201ENSMUST00000041362 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim35Q8C006 Gprc5d-201ENSMUST00000032327 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim35Q8C006 Hypk-202ENSMUST00000110612 4170 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Trim35Q8C006 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm15950-201ENSMUST00000162902 1973 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Trak2-205ENSMUST00000174120 2636 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Trim35Q8C006 Sgsh-201ENSMUST00000005173 4357 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm38056-201ENSMUST00000193928 5027 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm38012-201ENSMUST00000193022 3029 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm43336-201ENSMUST00000200487 4504 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Lrrc74a-201ENSMUST00000095527 1935 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
Trim35Q8C006 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
Trim35Q8C006 Igkv4-55-201ENSMUST00000103359 379 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Trim35Q8C006 8430423G03Rik-201ENSMUST00000110507 639 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trim35Q8C006 Btk-202ENSMUST00000113213 2121 ntTSL 5 BASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm14044-201ENSMUST00000117531 447 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm14796-201ENSMUST00000121216 959 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms