Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 AC174797.4-201ENSMUST00000225510 347 ntBASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 AC154527.3-201ENSMUST00000225519 989 ntBASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Sh3rf2Q8BZT2 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Gm8692-201ENSMUST00000118102 438 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Gm12788-201ENSMUST00000119090 308 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Gm15781-201ENSMUST00000120216 323 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Gm14925-201ENSMUST00000120611 438 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Gm12583-201ENSMUST00000120677 853 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Gm12105-201ENSMUST00000120846 779 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Gm15530-201ENSMUST00000122206 555 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Gm24733-201ENSMUST00000158863 253 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Gm16285-201ENSMUST00000162999 347 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Gm24111-201ENSMUST00000175491 97 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Gm28934-201ENSMUST00000186491 346 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Gm37024-201ENSMUST00000192224 868 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Gm6119-201ENSMUST00000193443 1206 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Gm37576-201ENSMUST00000194228 372 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Gm44312-201ENSMUST00000203536 469 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 AC139568.1-201ENSMUST00000222878 486 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 AC159205.4-201ENSMUST00000225964 704 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 AC120375.2-202ENSMUST00000228722 397 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 AC022775.1-201ENSMUST00000228163 2698 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Gm8822-201ENSMUST00000118948 2347 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Gm37965-201ENSMUST00000195304 1362 ntBASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Sh3rf2Q8BZT2 Thap6-201ENSMUST00000191860 3151 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms