Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Col16a1Q8BLX7 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Col16a1Q8BLX7 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC8.07□□□□□ -1.12
Col16a1Q8BLX7 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC8.07□□□□□ -1.12
Col16a1Q8BLX7 Gm27985-201ENSMUST00000185112 378 ntBASIC8.07□□□□□ -1.12
Col16a1Q8BLX7 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col16a1Q8BLX7 Gm42961-201ENSMUST00000202023 181 ntBASIC8.07□□□□□ -1.12
Col16a1Q8BLX7 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC8.07□□□□□ -1.12
Col16a1Q8BLX7 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col16a1Q8BLX7 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Col16a1Q8BLX7 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Col16a1Q8BLX7 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col16a1Q8BLX7 Gm7680-201ENSMUST00000216198 1348 ntBASIC8.07□□□□□ -1.12
Col16a1Q8BLX7 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Col16a1Q8BLX7 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col16a1Q8BLX7 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col16a1Q8BLX7 Gm37142-201ENSMUST00000193718 3110 ntBASIC8.07□□□□□ -1.12
Col16a1Q8BLX7 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
Col16a1Q8BLX7 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col16a1Q8BLX7 Plec-202ENSMUST00000054449 15018 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Col16a1Q8BLX7 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Col16a1Q8BLX7 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Col16a1Q8BLX7 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col16a1Q8BLX7 Gm42873-201ENSMUST00000196110 1726 ntBASIC8.07□□□□□ -1.12
Col16a1Q8BLX7 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col16a1Q8BLX7 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col16a1Q8BLX7 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Gm23806-201ENSMUST00000175157 109 ntBASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Gm38384-201ENSMUST00000195413 1122 ntBASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Gm45249-201ENSMUST00000211021 348 ntBASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 CT485612.1-201ENSMUST00000222555 382 ntBASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Mir188-201ENSMUST00000083464 68 ntBASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Tep1-201ENSMUST00000006444 8171 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Gm9923-201ENSMUST00000217785 1836 ntBASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Thap6-201ENSMUST00000191860 3151 ntBASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Myo6-203ENSMUST00000113266 7632 ntTSL 5 BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Gm38381-201ENSMUST00000193594 2275 ntBASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Muc6-201ENSMUST00000062451 8650 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col16a1Q8BLX7 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Gm12115-201ENSMUST00000119969 447 ntBASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Gm8545-201ENSMUST00000120692 801 ntBASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Gm13899-201ENSMUST00000121519 1255 ntBASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Gm23546-201ENSMUST00000158211 137 ntBASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Gm28973-201ENSMUST00000189310 613 ntBASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 AC154452.1-201ENSMUST00000225819 241 ntBASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 AV026068-231ENSMUST00000225862 482 ntBASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Gm8750-201ENSMUST00000173278 1537 ntBASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Gm37534-201ENSMUST00000194483 5222 ntBASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Gm36936-201ENSMUST00000194508 2749 ntBASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Gm44777-201ENSMUST00000205941 4052 ntBASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Gm44046-201ENSMUST00000203145 2678 ntBASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC8.05□□□□□ -1.12
Col16a1Q8BLX7 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms