Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Gm26037-201ENSMUST00000158150 311 ntBASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Gm10136-201ENSMUST00000183196 435 ntBASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Gm5853-201ENSMUST00000197183 632 ntBASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Gm43576-201ENSMUST00000197937 871 ntBASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Gm44361-201ENSMUST00000197960 94 ntBASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Gm43906-201ENSMUST00000203194 906 ntBASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Gm45626-201ENSMUST00000210093 361 ntBASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 AC170999.2-201ENSMUST00000226223 264 ntBASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 n-R5s41-201ENSMUST00000083025 119 ntBASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ccdc40Q8BI79 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm16511-201ENSMUST00000120019 564 ntBASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm11370-201ENSMUST00000120583 260 ntBASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm26486-201ENSMUST00000158021 110 ntBASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm23968-201ENSMUST00000175047 125 ntBASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm25244-201ENSMUST00000178089 132 ntBASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm9057-201ENSMUST00000198791 296 ntBASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm7452-201ENSMUST00000200764 788 ntBASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm5027-201ENSMUST00000206700 375 ntBASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm2996-201ENSMUST00000211398 537 ntBASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Gm33312-201ENSMUST00000222443 332 ntBASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Ccdc40Q8BI79 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms