Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.97□□□□□ -1.29
Usp49Q6P9L4 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.97□□□□□ -1.29
Usp49Q6P9L4 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Usp49Q6P9L4 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Usp49Q6P9L4 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Usp49Q6P9L4 AC115760.1-201ENSMUST00000225160 1327 ntBASIC6.97□□□□□ -1.29
Usp49Q6P9L4 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Usp49Q6P9L4 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Usp49Q6P9L4 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Usp49Q6P9L4 Gm42513-201ENSMUST00000197831 2119 ntBASIC6.97□□□□□ -1.29
Usp49Q6P9L4 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.97□□□□□ -1.29
Usp49Q6P9L4 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Usp49Q6P9L4 Gm44229-201ENSMUST00000203211 2487 ntBASIC6.96□□□□□ -1.29
Usp49Q6P9L4 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.96□□□□□ -1.29
Usp49Q6P9L4 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Usp49Q6P9L4 AC139350.2-201ENSMUST00000226508 2331 ntBASIC6.96□□□□□ -1.29
Usp49Q6P9L4 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Usp49Q6P9L4 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.29
Usp49Q6P9L4 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Usp49Q6P9L4 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Usp49Q6P9L4 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Gm45633-201ENSMUST00000210669 3253 ntBASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Gm13870-201ENSMUST00000117214 1023 ntBASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Gm13818-201ENSMUST00000119441 511 ntBASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Gm15275-201ENSMUST00000154752 347 ntBASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Gm25374-201ENSMUST00000158158 101 ntBASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Gm11107-201ENSMUST00000165414 505 ntBASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Gm19791-201ENSMUST00000180398 859 ntBASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Scgb2b33-201ENSMUST00000187413 334 ntBASIC6.96□□□□□ -1.3
Usp49Q6P9L4 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Usp49Q6P9L4 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Gm28996-201ENSMUST00000190316 721 ntBASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Gm37135-201ENSMUST00000192652 534 ntBASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Gm43762-201ENSMUST00000201521 295 ntBASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Gm45448-201ENSMUST00000211739 209 ntBASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC6.96□□□□□ -1.3
Usp49Q6P9L4 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.96□□□□□ -1.3
Usp49Q6P9L4 AC154642.1-201ENSMUST00000224173 740 ntBASIC6.96□□□□□ -1.3
Usp49Q6P9L4 AC129219.1-201ENSMUST00000224336 448 ntBASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Gm22300-201ENSMUST00000082661 126 ntBASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Usp49Q6P9L4 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Gm37926-201ENSMUST00000191922 2424 ntBASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
Usp49Q6P9L4 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Gm43612-201ENSMUST00000196087 3207 ntBASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Gm11271-201ENSMUST00000116054 440 ntBASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Gm13193-201ENSMUST00000117275 225 ntBASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Gm11256-201ENSMUST00000118109 829 ntBASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Gm7058-201ENSMUST00000119209 902 ntBASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Gm12654-201ENSMUST00000120387 587 ntBASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Gm4789-201ENSMUST00000121708 1216 ntBASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Gm6542-201ENSMUST00000153606 772 ntBASIC6.95□□□□□ -1.3
Usp49Q6P9L4 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Gm16269-201ENSMUST00000160532 409 ntBASIC6.95□□□□□ -1.3
Usp49Q6P9L4 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Gm17198-201ENSMUST00000171792 1154 ntBASIC6.95□□□□□ -1.3
Usp49Q6P9L4 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Usp49Q6P9L4 Rps12l1-201ENSMUST00000183090 399 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 132 ms