Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm42648-201ENSMUST00000200774 2505 ntBASIC9.35□□□□□ -0.91
Clcn1Q64347 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Clcn1Q64347 Gm42973-201ENSMUST00000197913 3200 ntBASIC9.35□□□□□ -0.91
Clcn1Q64347 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Clcn1Q64347 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Clcn1Q64347 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Clcn1Q64347 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 Pde1c-205ENSMUST00000166102 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clcn1Q64347 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Clcn1Q64347 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Clcn1Q64347 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC9.34□□□□□ -0.91
Clcn1Q64347 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Clcn1Q64347 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Clcn1Q64347 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clcn1Q64347 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Clcn1Q64347 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clcn1Q64347 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
Clcn1Q64347 Gm23133-201ENSMUST00000104255 135 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC9.34□□□□□ -0.91
Clcn1Q64347 Gm12713-201ENSMUST00000118404 764 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 Gm16056-201ENSMUST00000119293 135 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 Gm12262-201ENSMUST00000119915 305 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 Gm12903-201ENSMUST00000121015 544 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 Gm12045-201ENSMUST00000122122 573 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 Gm23883-201ENSMUST00000122686 290 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC9.34□□□□□ -0.91
Clcn1Q64347 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC9.34□□□□□ -0.91
Clcn1Q64347 Gm24685-201ENSMUST00000157764 285 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clcn1Q64347 Gm15914-201ENSMUST00000161922 309 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 Gm17137-202ENSMUST00000165729 957 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 Gm17155-201ENSMUST00000165969 473 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 Gm22642-201ENSMUST00000175352 252 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC9.34□□□□□ -0.91
Clcn1Q64347 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC9.34□□□□□ -0.91
Clcn1Q64347 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 Ighv1-41-201ENSMUST00000194414 329 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 Gm42461-201ENSMUST00000198627 1150 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 Gm5034-201ENSMUST00000199115 634 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 Gm36378-201ENSMUST00000201709 388 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 Gm31861-201ENSMUST00000204563 672 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC9.34□□□□□ -0.91
Clcn1Q64347 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC9.34□□□□□ -0.91
Clcn1Q64347 Gm5917-201ENSMUST00000217638 721 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 AC132384.5-201ENSMUST00000218562 226 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 AC116460.1-201ENSMUST00000219040 313 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 AC167977.1-201ENSMUST00000221384 234 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC9.34□□□□□ -0.91
Clcn1Q64347 AC131068.1-201ENSMUST00000226891 482 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clcn1Q64347 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clcn1Q64347 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clcn1Q64347 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clcn1Q64347 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC9.34□□□□□ -0.91
Clcn1Q64347 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Clcn1Q64347 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Clcn1Q64347 Gm38300-201ENSMUST00000194245 1870 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Clcn1Q64347 Gm37535-201ENSMUST00000194442 2365 ntBASIC9.34□□□□□ -0.91
Clcn1Q64347 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Clcn1Q64347 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Clcn1Q64347 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Clcn1Q64347 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Clcn1Q64347 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clcn1Q64347 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clcn1Q64347 Gm43209-201ENSMUST00000198949 1588 ntBASIC9.33□□□□□ -0.92
Clcn1Q64347 Gm43982-201ENSMUST00000204995 1829 ntBASIC9.33□□□□□ -0.92
Clcn1Q64347 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clcn1Q64347 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC9.33□□□□□ -0.92
Clcn1Q64347 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clcn1Q64347 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clcn1Q64347 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC9.33□□□□□ -0.92
Clcn1Q64347 Wnk1-218ENSMUST00000161512 1426 ntBASIC9.33□□□□□ -0.92
Clcn1Q64347 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Clcn1Q64347 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
Clcn1Q64347 Gm21152-201ENSMUST00000190271 3483 ntBASIC9.33□□□□□ -0.92
Clcn1Q64347 Gm37786-201ENSMUST00000191714 3225 ntBASIC9.33□□□□□ -0.92
Clcn1Q64347 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Clcn1Q64347 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Clcn1Q64347 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Clcn1Q64347 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC9.33□□□□□ -0.92
Clcn1Q64347 Gm14755-201ENSMUST00000118037 384 ntBASIC9.33□□□□□ -0.92
Clcn1Q64347 Gm12929-201ENSMUST00000122406 370 ntBASIC9.33□□□□□ -0.92
Clcn1Q64347 Gm26480-201ENSMUST00000122619 297 ntBASIC9.33□□□□□ -0.92
Clcn1Q64347 Gm25808-201ENSMUST00000122784 284 ntBASIC9.33□□□□□ -0.92
Clcn1Q64347 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Clcn1Q64347 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Clcn1Q64347 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC9.33□□□□□ -0.92
Clcn1Q64347 Gm22728-201ENSMUST00000158087 129 ntBASIC9.33□□□□□ -0.92
Clcn1Q64347 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC9.33□□□□□ -0.92
Clcn1Q64347 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC9.33□□□□□ -0.92
Clcn1Q64347 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Clcn1Q64347 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC9.33□□□□□ -0.92
Clcn1Q64347 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Clcn1Q64347 Mir8105-201ENSMUST00000184718 89 ntBASIC9.33□□□□□ -0.92
Clcn1Q64347 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC9.33□□□□□ -0.92
Clcn1Q64347 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms