Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm21728-201ENSMUST00000188442 695 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm21889-201ENSMUST00000188487 695 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm20932-201ENSMUST00000189115 694 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm21920-201ENSMUST00000190042 695 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm5853-201ENSMUST00000197183 632 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm31306-201ENSMUST00000197517 508 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm30275-201ENSMUST00000197620 498 ntTSL 2 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 4933439J24Rik-201ENSMUST00000200866 853 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm5176-201ENSMUST00000218244 1227 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm9289-201ENSMUST00000221269 606 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 AC154747.4-202ENSMUST00000223826 852 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 AC124450.1-201ENSMUST00000225569 495 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 AC139569.1-201ENSMUST00000226080 614 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 AC140208.1-201ENSMUST00000226609 285 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm23927-201ENSMUST00000082466 215 ntBASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ccbe1Q3MI99 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm37435-201ENSMUST00000192078 3947 ntBASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm5715-201ENSMUST00000196854 1465 ntBASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm43319-201ENSMUST00000198036 2270 ntBASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm16409-201ENSMUST00000100510 747 ntBASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm6746-201ENSMUST00000108774 483 ntBASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm23987-201ENSMUST00000117039 129 ntBASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm8858-201ENSMUST00000118259 342 ntBASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm12604-201ENSMUST00000118382 380 ntBASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm6877-201ENSMUST00000119347 1101 ntBASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm13877-201ENSMUST00000120614 417 ntBASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm9143-201ENSMUST00000120745 745 ntBASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm16248-201ENSMUST00000124238 243 ntBASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm15274-201ENSMUST00000131442 291 ntBASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm21979-201ENSMUST00000139887 291 ntBASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm15259-201ENSMUST00000151262 291 ntBASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm25962-201ENSMUST00000157173 168 ntBASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm26486-201ENSMUST00000158021 110 ntBASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm23059-201ENSMUST00000158978 107 ntBASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm6838-201ENSMUST00000172851 582 ntBASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm24576-201ENSMUST00000175508 248 ntBASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm7426-201ENSMUST00000179046 404 ntBASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Txn-ps1-201ENSMUST00000186385 309 ntBASIC6.17□□□□□ -1.42
Ccbe1Q3MI99 Gm6799-201ENSMUST00000186919 573 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms