Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim63Q38HM4 H2al1a-201ENSMUST00000188439 501 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm21728-201ENSMUST00000188442 695 ntBASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm21889-201ENSMUST00000188487 695 ntBASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm21920-201ENSMUST00000190042 695 ntBASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm17895-201ENSMUST00000194028 874 ntBASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm43694-201ENSMUST00000200773 1119 ntBASIC5.53□□□□□ -1.52
Trim63Q38HM4 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm18689-201ENSMUST00000203969 902 ntBASIC5.53□□□□□ -1.52
Trim63Q38HM4 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm18877-201ENSMUST00000207706 539 ntBASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm44714-201ENSMUST00000208665 657 ntTSL 3 BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC5.53□□□□□ -1.52
Trim63Q38HM4 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trim63Q38HM4 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC5.53□□□□□ -1.52
Trim63Q38HM4 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Ryk-ps1-201ENSMUST00000219713 235 ntBASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC5.53□□□□□ -1.52
Trim63Q38HM4 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm4012-201ENSMUST00000221504 581 ntBASIC5.53□□□□□ -1.52
Trim63Q38HM4 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm18362-201ENSMUST00000221786 529 ntBASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm9315-201ENSMUST00000222696 908 ntBASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Arl15-202ENSMUST00000224068 1002 ntBASIC5.53□□□□□ -1.52
Trim63Q38HM4 AC108416.3-201ENSMUST00000226148 557 ntBASIC5.53□□□□□ -1.52
Trim63Q38HM4 AC157772.1-201ENSMUST00000226266 365 ntBASIC5.53□□□□□ -1.52
Trim63Q38HM4 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.53□□□□□ -1.52
Trim63Q38HM4 AC147096.1-201ENSMUST00000227648 352 ntBASIC5.53□□□□□ -1.52
Trim63Q38HM4 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Llcfc1-201ENSMUST00000031900 741 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Spaca5-201ENSMUST00000040437 640 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Trim63Q38HM4 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim63Q38HM4 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Olfr1535-201ENSMUST00000068163 981 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm9761-201ENSMUST00000075650 492 ntBASIC5.53□□□□□ -1.52
Trim63Q38HM4 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm23846-201ENSMUST00000083835 107 ntBASIC5.53□□□□□ -1.52
Trim63Q38HM4 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim63Q38HM4 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC5.53□□□□□ -1.52
Trim63Q38HM4 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm43031-201ENSMUST00000198500 1887 ntBASIC5.53□□□□□ -1.52
Trim63Q38HM4 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm6767-201ENSMUST00000118650 1381 ntBASIC5.53□□□□□ -1.52
Trim63Q38HM4 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.53□□□□□ -1.52
Trim63Q38HM4 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Trim63Q38HM4 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
Trim63Q38HM4 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim63Q38HM4 Gm8177-201ENSMUST00000181591 1336 ntBASIC5.52□□□□□ -1.53
Trim63Q38HM4 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trim63Q38HM4 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.52□□□□□ -1.53
Trim63Q38HM4 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
Trim63Q38HM4 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.52□□□□□ -1.53
Trim63Q38HM4 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
Trim63Q38HM4 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Trim63Q38HM4 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim63Q38HM4 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim63Q38HM4 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim63Q38HM4 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim63Q38HM4 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim63Q38HM4 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim63Q38HM4 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Trim63Q38HM4 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.52□□□□□ -1.53
Trim63Q38HM4 Gm27013-202ENSMUST00000205067 1436 ntBASIC5.52□□□□□ -1.53
Trim63Q38HM4 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trim63Q38HM4 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Trim63Q38HM4 Phyhd1-203ENSMUST00000113643 1195 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim63Q38HM4 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trim63Q38HM4 Gm25000-201ENSMUST00000117016 114 ntBASIC5.52□□□□□ -1.53
Trim63Q38HM4 Gm12038-201ENSMUST00000117322 207 ntBASIC5.52□□□□□ -1.53
Trim63Q38HM4 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC5.52□□□□□ -1.53
Trim63Q38HM4 Zfp389-201ENSMUST00000118425 675 ntBASIC5.52□□□□□ -1.53
Trim63Q38HM4 n-R5s43-201ENSMUST00000122739 110 ntBASIC5.52□□□□□ -1.53
Trim63Q38HM4 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.52□□□□□ -1.53
Trim63Q38HM4 Gm14344-201ENSMUST00000139338 580 ntTSL 3 BASIC5.52□□□□□ -1.53
Trim63Q38HM4 Gm14368-201ENSMUST00000145305 415 ntBASIC5.52□□□□□ -1.53
Trim63Q38HM4 Gm4473-201ENSMUST00000145987 657 ntTSL 2 BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms