Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm18701-201ENSMUST00000188281 1536 ntBASIC5.71□□□□□ -1.5
Scn1bP97952 Mir711-201ENSMUST00000102188 82 ntBASIC5.71□□□□□ -1.5
Scn1bP97952 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Scn1bP97952 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Scn1bP97952 Gm25564-201ENSMUST00000104604 132 ntBASIC5.71□□□□□ -1.5
Scn1bP97952 Gm13260-201ENSMUST00000117797 1264 ntBASIC5.71□□□□□ -1.5
Scn1bP97952 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC5.71□□□□□ -1.5
Scn1bP97952 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC5.71□□□□□ -1.5
Scn1bP97952 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC5.71□□□□□ -1.5
Scn1bP97952 Gm22523-201ENSMUST00000158696 100 ntBASIC5.71□□□□□ -1.5
Scn1bP97952 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Scn1bP97952 Gm4845-201ENSMUST00000179202 562 ntBASIC5.71□□□□□ -1.5
Scn1bP97952 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Scn1bP97952 Gm21577-201ENSMUST00000190823 697 ntBASIC5.71□□□□□ -1.5
Scn1bP97952 Gm37620-201ENSMUST00000192910 501 ntBASIC5.71□□□□□ -1.5
Scn1bP97952 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC5.71□□□□□ -1.5
Scn1bP97952 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC5.71□□□□□ -1.5
Scn1bP97952 Ighv1-45-201ENSMUST00000193677 352 ntBASIC5.71□□□□□ -1.5
Scn1bP97952 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC5.71□□□□□ -1.5
Scn1bP97952 Gm44463-201ENSMUST00000198895 137 ntBASIC5.71□□□□□ -1.5
Scn1bP97952 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC5.71□□□□□ -1.5
Scn1bP97952 Gm29778-201ENSMUST00000201667 466 ntBASIC5.71□□□□□ -1.5
Scn1bP97952 Gm34272-201ENSMUST00000208886 253 ntBASIC5.71□□□□□ -1.5
Scn1bP97952 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC5.71□□□□□ -1.5
Scn1bP97952 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC5.71□□□□□ -1.5
Scn1bP97952 Gm3785-201ENSMUST00000221000 202 ntBASIC5.71□□□□□ -1.5
Scn1bP97952 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Scn1bP97952 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.71□□□□□ -1.5
Scn1bP97952 CT030705.2-201ENSMUST00000225301 556 ntBASIC5.71□□□□□ -1.5
Scn1bP97952 AC116591.1-201ENSMUST00000227919 351 ntBASIC5.71□□□□□ -1.5
Scn1bP97952 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Scn1bP97952 n-R5s169-201ENSMUST00000083110 120 ntBASIC5.71□□□□□ -1.5
Scn1bP97952 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC5.71□□□□□ -1.5
Scn1bP97952 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
Scn1bP97952 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.71□□□□□ -1.5
Scn1bP97952 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scn1bP97952 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scn1bP97952 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scn1bP97952 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
Scn1bP97952 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Scn1bP97952 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.71□□□□□ -1.5
Scn1bP97952 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scn1bP97952 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.71□□□□□ -1.5
Scn1bP97952 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
Scn1bP97952 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC5.71□□□□□ -1.5
Scn1bP97952 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Scn1bP97952 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1bP97952 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1bP97952 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scn1bP97952 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scn1bP97952 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scn1bP97952 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.7□□□□□ -1.5
Scn1bP97952 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1bP97952 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 Gm29761-201ENSMUST00000215964 1939 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1bP97952 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1bP97952 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
Scn1bP97952 Gm37864-201ENSMUST00000195308 3075 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 Gm24173-201ENSMUST00000104130 128 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 Gm25379-201ENSMUST00000104338 114 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 Gm25724-201ENSMUST00000104531 117 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Scn1bP97952 Gm15621-201ENSMUST00000119162 364 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Scn1bP97952 Gm13357-201ENSMUST00000120528 537 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 Gm15242-201ENSMUST00000122459 283 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC5.7□□□□□ -1.5
Scn1bP97952 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1bP97952 Gm17205-201ENSMUST00000168370 1207 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Scn1bP97952 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Scn1bP97952 Gm20615-201ENSMUST00000177503 705 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 Gm23018-201ENSMUST00000177928 109 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 Gm4308-201ENSMUST00000179735 914 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 Gm26509-201ENSMUST00000180947 948 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1bP97952 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Scn1bP97952 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC5.7□□□□□ -1.5
Scn1bP97952 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Scn1bP97952 Gm20926-201ENSMUST00000194457 696 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 Gm42804-201ENSMUST00000199701 178 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC5.7□□□□□ -1.5
Scn1bP97952 Gm29759-201ENSMUST00000205860 327 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 Gm18907-201ENSMUST00000209719 932 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC5.7□□□□□ -1.5
Scn1bP97952 Gm46203-201ENSMUST00000218130 478 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 AC122539.1-201ENSMUST00000219925 329 ntBASIC5.7□□□□□ -1.5
Scn1bP97952 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
Scn1bP97952 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1bP97952 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Scn1bP97952 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Scn1bP97952 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1bP97952 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1bP97952 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms