Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Nkx3-1P97436 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC5.45□□□□□ -1.54
Nkx3-1P97436 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Nkx3-1P97436 Gm7048-201ENSMUST00000199395 1891 ntBASIC5.45□□□□□ -1.54
Nkx3-1P97436 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC5.45□□□□□ -1.54
Nkx3-1P97436 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Nkx3-1P97436 Gm44215-201ENSMUST00000204910 2711 ntBASIC5.45□□□□□ -1.54
Nkx3-1P97436 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
Nkx3-1P97436 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Nkx3-1P97436 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Nkx3-1P97436 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Nkx3-1P97436 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC5.44□□□□□ -1.54
Nkx3-1P97436 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.44□□□□□ -1.54
Nkx3-1P97436 Gm37914-201ENSMUST00000195317 2679 ntBASIC5.44□□□□□ -1.54
Nkx3-1P97436 Gm2223-201ENSMUST00000112099 1350 ntBASIC5.44□□□□□ -1.54
Nkx3-1P97436 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Nkx3-1P97436 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Nkx3-1P97436 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Nkx3-1P97436 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.44□□□□□ -1.54
Nkx3-1P97436 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC5.44□□□□□ -1.54
Nkx3-1P97436 Mup-ps16-201ENSMUST00000120085 596 ntBASIC5.44□□□□□ -1.54
Nkx3-1P97436 Gm14237-201ENSMUST00000122080 430 ntBASIC5.44□□□□□ -1.54
Nkx3-1P97436 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Nkx3-1P97436 Gm24719-201ENSMUST00000157520 110 ntBASIC5.44□□□□□ -1.54
Nkx3-1P97436 Gm23030-201ENSMUST00000158004 273 ntBASIC5.44□□□□□ -1.54
Nkx3-1P97436 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC5.44□□□□□ -1.54
Nkx3-1P97436 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Nkx3-1P97436 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC5.44□□□□□ -1.54
Nkx3-1P97436 Gm27960-201ENSMUST00000183445 184 ntBASIC5.44□□□□□ -1.54
Nkx3-1P97436 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC5.44□□□□□ -1.54
Nkx3-1P97436 Gm6119-201ENSMUST00000193443 1206 ntBASIC5.44□□□□□ -1.54
Nkx3-1P97436 Gm43382-201ENSMUST00000198954 838 ntBASIC5.44□□□□□ -1.54
Nkx3-1P97436 Gm42989-201ENSMUST00000200646 2306 ntBASIC5.44□□□□□ -1.54
Nkx3-1P97436 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Nkx3-1P97436 Gm33178-201ENSMUST00000212090 257 ntBASIC5.44□□□□□ -1.54
Nkx3-1P97436 Gm45850-201ENSMUST00000212536 338 ntBASIC5.44□□□□□ -1.54
Nkx3-1P97436 Gm7780-201ENSMUST00000214787 406 ntBASIC5.44□□□□□ -1.54
Nkx3-1P97436 Gm18592-201ENSMUST00000221529 276 ntBASIC5.44□□□□□ -1.54
Nkx3-1P97436 Gm19195-201ENSMUST00000222018 511 ntBASIC5.44□□□□□ -1.54
Nkx3-1P97436 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Nkx3-1P97436 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Nkx3-1P97436 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Nkx3-1P97436 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC5.44□□□□□ -1.54
Nkx3-1P97436 Gm5436-201ENSMUST00000058103 643 ntBASIC5.44□□□□□ -1.54
Nkx3-1P97436 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Nkx3-1P97436 Gm37913-201ENSMUST00000192925 2544 ntBASIC5.44□□□□□ -1.54
Nkx3-1P97436 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC5.44□□□□□ -1.54
Nkx3-1P97436 AC158388.2-201ENSMUST00000223665 1314 ntBASIC5.44□□□□□ -1.54
Nkx3-1P97436 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
Nkx3-1P97436 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Nkx3-1P97436 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC5.44□□□□□ -1.54
Nkx3-1P97436 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Nkx3-1P97436 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Nkx3-1P97436 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Nkx3-1P97436 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Nkx3-1P97436 Gm37685-201ENSMUST00000193507 2177 ntBASIC5.43□□□□□ -1.54
Nkx3-1P97436 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Gm43577-201ENSMUST00000197090 3344 ntBASIC5.43□□□□□ -1.54
Nkx3-1P97436 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Gm44584-201ENSMUST00000208395 2880 ntBASIC5.43□□□□□ -1.54
Nkx3-1P97436 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Gm37107-201ENSMUST00000195326 2552 ntBASIC5.43□□□□□ -1.54
Nkx3-1P97436 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Gm9894-201ENSMUST00000171257 2904 ntBASIC5.43□□□□□ -1.54
Nkx3-1P97436 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Gm7146-201ENSMUST00000116079 739 ntBASIC5.43□□□□□ -1.54
Nkx3-1P97436 Gm13428-201ENSMUST00000117540 365 ntBASIC5.43□□□□□ -1.54
Nkx3-1P97436 Gm14173-201ENSMUST00000117690 278 ntBASIC5.43□□□□□ -1.54
Nkx3-1P97436 Gm14529-201ENSMUST00000117894 406 ntBASIC5.43□□□□□ -1.54
Nkx3-1P97436 Gm14805-201ENSMUST00000120172 340 ntBASIC5.43□□□□□ -1.54
Nkx3-1P97436 Gm7931-201ENSMUST00000121537 271 ntBASIC5.43□□□□□ -1.54
Nkx3-1P97436 Gm15237-201ENSMUST00000122104 469 ntBASIC5.43□□□□□ -1.54
Nkx3-1P97436 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Nkx3-1P97436 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Gm11545-201ENSMUST00000146507 375 ntBASIC5.43□□□□□ -1.54
Nkx3-1P97436 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Gm24395-201ENSMUST00000158139 125 ntBASIC5.43□□□□□ -1.54
Nkx3-1P97436 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Mir7235-201ENSMUST00000183796 56 ntBASIC5.43□□□□□ -1.54
Nkx3-1P97436 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Mir7674-201ENSMUST00000184964 63 ntBASIC5.43□□□□□ -1.54
Nkx3-1P97436 Gm5692-201ENSMUST00000187254 1057 ntBASIC5.43□□□□□ -1.54
Nkx3-1P97436 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.43□□□□□ -1.54
Nkx3-1P97436 n-TStga1-201ENSMUST00000199903 109 ntBASIC5.43□□□□□ -1.54
Nkx3-1P97436 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC5.43□□□□□ -1.54
Nkx3-1P97436 AC122371.2-201ENSMUST00000220583 366 ntBASIC5.43□□□□□ -1.54
Nkx3-1P97436 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Nkx3-1P97436 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 118.7 ms