Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm22990-201ENSMUST00000175427 89 ntBASIC8.86□□□□□ -0.99
Nkx2-3P97334 Gm28489-201ENSMUST00000186655 316 ntBASIC8.86□□□□□ -0.99
Nkx2-3P97334 Gm28414-201ENSMUST00000190111 294 ntBASIC8.86□□□□□ -0.99
Nkx2-3P97334 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Nkx2-3P97334 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC8.86□□□□□ -0.99
Nkx2-3P97334 Gm5711-201ENSMUST00000197896 421 ntBASIC8.86□□□□□ -0.99
Nkx2-3P97334 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC8.86□□□□□ -0.99
Nkx2-3P97334 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC8.86□□□□□ -0.99
Nkx2-3P97334 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC8.86□□□□□ -0.99
Nkx2-3P97334 Gm43659-201ENSMUST00000200894 628 ntBASIC8.86□□□□□ -0.99
Nkx2-3P97334 Gm34149-201ENSMUST00000203547 304 ntBASIC8.86□□□□□ -0.99
Nkx2-3P97334 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC8.86□□□□□ -0.99
Nkx2-3P97334 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Nkx2-3P97334 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC8.86□□□□□ -0.99
Nkx2-3P97334 Gm5928-201ENSMUST00000221839 466 ntBASIC8.86□□□□□ -0.99
Nkx2-3P97334 AC161252.1-201ENSMUST00000225536 467 ntBASIC8.86□□□□□ -0.99
Nkx2-3P97334 CT009711.4-201ENSMUST00000225685 198 ntBASIC8.86□□□□□ -0.99
Nkx2-3P97334 AC158750.1-201ENSMUST00000226163 634 ntBASIC8.86□□□□□ -0.99
Nkx2-3P97334 AC154323.2-201ENSMUST00000226557 1151 ntBASIC8.86□□□□□ -0.99
Nkx2-3P97334 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Nkx2-3P97334 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Nkx2-3P97334 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Nkx2-3P97334 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Nkx2-3P97334 Ap3s2-201ENSMUST00000075657 5813 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Nkx2-3P97334 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC8.86□□□□□ -0.99
Nkx2-3P97334 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Nkx2-3P97334 Fam135b-201ENSMUST00000022953 4623 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Nkx2-3P97334 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Nkx2-3P97334 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Nkx2-3P97334 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Nkx2-3P97334 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Nkx2-3P97334 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Nkx2-3P97334 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Nkx2-3P97334 Olfr943-204ENSMUST00000213830 8305 ntAPPRIS ALT2 TSL 3 BASIC8.86□□□□□ -0.99
Nkx2-3P97334 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Nkx2-3P97334 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Nkx2-3P97334 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Gm38244-201ENSMUST00000191737 2586 ntBASIC8.85□□□□□ -0.99
Nkx2-3P97334 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Nkx2-3P97334 AC156025.3-201ENSMUST00000225919 3095 ntBASIC8.85□□□□□ -0.99
Nkx2-3P97334 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Pkd1-201ENSMUST00000035565 14164 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Gm15443-201ENSMUST00000118947 820 ntBASIC8.85□□□□□ -0.99
Nkx2-3P97334 Gm15311-201ENSMUST00000119682 282 ntBASIC8.85□□□□□ -0.99
Nkx2-3P97334 Gm15305-201ENSMUST00000120354 288 ntBASIC8.85□□□□□ -0.99
Nkx2-3P97334 Gm16412-201ENSMUST00000121602 273 ntBASIC8.85□□□□□ -0.99
Nkx2-3P97334 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Gm10177-202ENSMUST00000161698 207 ntBASIC8.85□□□□□ -0.99
Nkx2-3P97334 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Gm20432-201ENSMUST00000173716 250 ntBASIC8.85□□□□□ -0.99
Nkx2-3P97334 Gm9285-201ENSMUST00000177691 697 ntBASIC8.85□□□□□ -0.99
Nkx2-3P97334 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Gm18727-201ENSMUST00000185981 553 ntBASIC8.85□□□□□ -0.99
Nkx2-3P97334 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Ighv1-83-201ENSMUST00000199643 351 ntBASIC8.85□□□□□ -0.99
Nkx2-3P97334 Gm20223-201ENSMUST00000199932 805 ntBASIC8.85□□□□□ -0.99
Nkx2-3P97334 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC8.85□□□□□ -0.99
Nkx2-3P97334 AC132384.8-201ENSMUST00000218152 1204 ntBASIC8.85□□□□□ -0.99
Nkx2-3P97334 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
Nkx2-3P97334 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC8.85□□□□□ -0.99
Nkx2-3P97334 AC156560.1-201ENSMUST00000221425 256 ntBASIC8.85□□□□□ -0.99
Nkx2-3P97334 Gm5374-202ENSMUST00000222910 314 ntBASIC8.85□□□□□ -0.99
Nkx2-3P97334 AC156790.1-201ENSMUST00000226572 559 ntBASIC8.85□□□□□ -0.99
Nkx2-3P97334 AC135086.1-201ENSMUST00000228621 817 ntBASIC8.85□□□□□ -0.99
Nkx2-3P97334 AC154806.5-204ENSMUST00000228900 867 ntBASIC8.85□□□□□ -0.99
Nkx2-3P97334 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Nkx2-3P97334 AW822073-201ENSMUST00000075305 555 ntBASIC8.85□□□□□ -0.99
Nkx2-3P97334 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Mir129-2-201ENSMUST00000083577 90 ntBASIC8.85□□□□□ -0.99
Nkx2-3P97334 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Klhl32-203ENSMUST00000108214 5970 ntTSL 5 BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC8.85□□□□□ -0.99
Nkx2-3P97334 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC8.85□□□□□ -0.99
Nkx2-3P97334 Med1-203ENSMUST00000107545 8024 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Nkx2-3P97334 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Nkx2-3P97334 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Gm37611-201ENSMUST00000195250 2028 ntBASIC8.85□□□□□ -0.99
Nkx2-3P97334 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Cltc-202ENSMUST00000103186 6519 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Nkx2-3P97334 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC8.85□□□□□ -0.99
Nkx2-3P97334 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms