Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PrkdcP97313 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PrkdcP97313 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
PrkdcP97313 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC4.09□□□□□ -1.75
PrkdcP97313 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PrkdcP97313 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
PrkdcP97313 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PrkdcP97313 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
PrkdcP97313 Gm22276-201ENSMUST00000122469 129 ntBASIC4.09□□□□□ -1.75
PrkdcP97313 Gm25292-201ENSMUST00000122797 322 ntBASIC4.09□□□□□ -1.75
PrkdcP97313 Gm22870-201ENSMUST00000157501 112 ntBASIC4.09□□□□□ -1.75
PrkdcP97313 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PrkdcP97313 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PrkdcP97313 Gm28665-201ENSMUST00000189269 670 ntBASIC4.09□□□□□ -1.75
PrkdcP97313 Gm44837-201ENSMUST00000206863 717 ntBASIC4.09□□□□□ -1.75
PrkdcP97313 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC4.09□□□□□ -1.75
PrkdcP97313 Gm45908-201ENSMUST00000212977 1177 ntBASIC4.09□□□□□ -1.75
PrkdcP97313 Mir346-201ENSMUST00000083547 98 ntBASIC4.09□□□□□ -1.75
PrkdcP97313 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PrkdcP97313 Gm43014-201ENSMUST00000198568 2443 ntBASIC4.09□□□□□ -1.75
PrkdcP97313 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PrkdcP97313 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PrkdcP97313 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.76
PrkdcP97313 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PrkdcP97313 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PrkdcP97313 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
PrkdcP97313 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PrkdcP97313 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
PrkdcP97313 Gm6062-201ENSMUST00000120462 631 ntBASIC4.09□□□□□ -1.76
PrkdcP97313 Gm11677-201ENSMUST00000121349 977 ntBASIC4.09□□□□□ -1.76
PrkdcP97313 Gm7973-201ENSMUST00000122107 488 ntBASIC4.09□□□□□ -1.76
PrkdcP97313 Magea9-ps-201ENSMUST00000140655 732 ntBASIC4.09□□□□□ -1.76
PrkdcP97313 Gm16250-201ENSMUST00000148974 256 ntBASIC4.09□□□□□ -1.76
PrkdcP97313 Gm23327-201ENSMUST00000157420 78 ntBASIC4.09□□□□□ -1.76
PrkdcP97313 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
PrkdcP97313 Magea9-ps-202ENSMUST00000167328 899 ntBASIC4.09□□□□□ -1.76
PrkdcP97313 Gm18702-201ENSMUST00000196923 588 ntBASIC4.09□□□□□ -1.76
PrkdcP97313 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC4.09□□□□□ -1.76
PrkdcP97313 AC133517.2-201ENSMUST00000226820 690 ntBASIC4.09□□□□□ -1.76
PrkdcP97313 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PrkdcP97313 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PrkdcP97313 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
PrkdcP97313 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
PrkdcP97313 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PrkdcP97313 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
PrkdcP97313 Plec-207ENSMUST00000076442 15439 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.76
PrkdcP97313 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PrkdcP97313 Gm6818-201ENSMUST00000190556 2558 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 Gm44863-201ENSMUST00000207613 1422 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Sipa1l2-201ENSMUST00000108775 6365 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
PrkdcP97313 Ick-202ENSMUST00000044551 6560 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Il16-201ENSMUST00000001792 5260 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Rbbp4-201ENSMUST00000102598 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC4.08□□□□□ -1.76
PrkdcP97313 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
PrkdcP97313 Gm14472-201ENSMUST00000119815 282 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 Gm7363-201ENSMUST00000119883 399 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 Gm16276-201ENSMUST00000131218 262 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC4.08□□□□□ -1.76
PrkdcP97313 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 Gm29357-201ENSMUST00000186877 698 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC4.08□□□□□ -1.76
PrkdcP97313 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 Gm18863-201ENSMUST00000217004 1299 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 AC126554.2-201ENSMUST00000223259 400 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Grik1-210ENSMUST00000228034 2708 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PrkdcP97313 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PrkdcP97313 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PrkdcP97313 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
PrkdcP97313 AC132852.2-201ENSMUST00000216052 2794 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 Svet1-201ENSMUST00000209370 3940 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
PrkdcP97313 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Gm8367-201ENSMUST00000186145 887 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 Gm4290-201ENSMUST00000206897 814 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC4.08□□□□□ -1.76
PrkdcP97313 Gm18924-201ENSMUST00000211929 316 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC4.08□□□□□ -1.76
PrkdcP97313 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 AC134860.6-201ENSMUST00000226038 285 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PrkdcP97313 Mir129-1-201ENSMUST00000083535 73 ntBASIC4.08□□□□□ -1.76
PrkdcP97313 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
PrkdcP97313 Hcfc1-201ENSMUST00000033761 8138 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PrkdcP97313 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms