Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
H3f3aP84244 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC5.54□□□□□ -1.52
H3f3aP84244 Gm2080-201ENSMUST00000211299 1573 ntBASIC5.54□□□□□ -1.52
H3f3aP84244 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.54□□□□□ -1.52
H3f3aP84244 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC5.54□□□□□ -1.52
H3f3aP84244 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
H3f3aP84244 Gm14324-201ENSMUST00000121358 3051 ntBASIC5.54□□□□□ -1.52
H3f3aP84244 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
H3f3aP84244 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
H3f3aP84244 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
H3f3aP84244 AC159244.3-201ENSMUST00000222887 3153 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
H3f3aP84244 Gm11242-201ENSMUST00000120103 2457 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
H3f3aP84244 Gm42513-201ENSMUST00000197831 2119 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
H3f3aP84244 Gm13193-201ENSMUST00000117275 225 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
H3f3aP84244 Gm11256-201ENSMUST00000118109 829 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 Gm11925-201ENSMUST00000121375 535 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 Gm11609-201ENSMUST00000121926 793 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
H3f3aP84244 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
H3f3aP84244 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC5.53□□□□□ -1.52
H3f3aP84244 Gm18006-201ENSMUST00000177411 662 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 Rps12l1-201ENSMUST00000183090 399 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.53□□□□□ -1.52
H3f3aP84244 Gm27348-201ENSMUST00000184511 170 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.53□□□□□ -1.52
H3f3aP84244 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC5.53□□□□□ -1.52
H3f3aP84244 Gm43744-201ENSMUST00000196387 688 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
H3f3aP84244 Gm1969-201ENSMUST00000198125 1220 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 Gm43157-201ENSMUST00000198223 412 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 Gm44538-201ENSMUST00000205615 348 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC5.53□□□□□ -1.52
H3f3aP84244 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC5.53□□□□□ -1.52
H3f3aP84244 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC5.53□□□□□ -1.52
H3f3aP84244 AC163743.1-201ENSMUST00000224309 270 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 AC122290.1-201ENSMUST00000225631 1078 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 AC133203.1-201ENSMUST00000228241 301 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
H3f3aP84244 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
H3f3aP84244 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
H3f3aP84244 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
H3f3aP84244 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
H3f3aP84244 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
H3f3aP84244 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
H3f3aP84244 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
H3f3aP84244 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
H3f3aP84244 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
H3f3aP84244 AC155710.1-201ENSMUST00000219913 1353 ntBASIC5.53□□□□□ -1.52
H3f3aP84244 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
H3f3aP84244 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
H3f3aP84244 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
H3f3aP84244 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
H3f3aP84244 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
H3f3aP84244 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
H3f3aP84244 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
H3f3aP84244 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
H3f3aP84244 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
H3f3aP84244 Gm43872-201ENSMUST00000203218 2213 ntBASIC5.52□□□□□ -1.53
H3f3aP84244 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
H3f3aP84244 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
H3f3aP84244 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
H3f3aP84244 Gm38085-201ENSMUST00000195785 3062 ntBASIC5.52□□□□□ -1.53
H3f3aP84244 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
H3f3aP84244 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC5.52□□□□□ -1.53
H3f3aP84244 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
H3f3aP84244 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
H3f3aP84244 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
H3f3aP84244 Gm8401-201ENSMUST00000120248 1739 ntBASIC5.52□□□□□ -1.53
H3f3aP84244 AC154612.1-202ENSMUST00000224806 1725 ntBASIC5.52□□□□□ -1.53
H3f3aP84244 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
H3f3aP84244 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
H3f3aP84244 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
H3f3aP84244 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
H3f3aP84244 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
H3f3aP84244 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
H3f3aP84244 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
H3f3aP84244 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.52□□□□□ -1.53
H3f3aP84244 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
H3f3aP84244 Gm12262-201ENSMUST00000119915 305 ntBASIC5.52□□□□□ -1.53
H3f3aP84244 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.52□□□□□ -1.53
H3f3aP84244 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC5.52□□□□□ -1.53
H3f3aP84244 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
H3f3aP84244 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
H3f3aP84244 Gm25962-201ENSMUST00000157173 168 ntBASIC5.52□□□□□ -1.53
H3f3aP84244 Gm22223-201ENSMUST00000157360 125 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms