Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.82□□□□□ -1.32
CiitaP79621 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC6.82□□□□□ -1.32
CiitaP79621 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC6.82□□□□□ -1.32
CiitaP79621 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.82□□□□□ -1.32
CiitaP79621 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC6.82□□□□□ -1.32
CiitaP79621 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CiitaP79621 Gm9292-201ENSMUST00000222008 710 ntBASIC6.82□□□□□ -1.32
CiitaP79621 AV026068-216ENSMUST00000223874 328 ntBASIC6.82□□□□□ -1.32
CiitaP79621 AV026068-218ENSMUST00000223980 575 ntBASIC6.82□□□□□ -1.32
CiitaP79621 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CiitaP79621 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CiitaP79621 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CiitaP79621 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CiitaP79621 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CiitaP79621 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CiitaP79621 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC6.82□□□□□ -1.32
CiitaP79621 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CiitaP79621 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CiitaP79621 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CiitaP79621 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CiitaP79621 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CiitaP79621 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC6.82□□□□□ -1.32
CiitaP79621 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC6.82□□□□□ -1.32
CiitaP79621 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CiitaP79621 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CiitaP79621 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CiitaP79621 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CiitaP79621 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CiitaP79621 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CiitaP79621 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC6.81□□□□□ -1.32
CiitaP79621 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.81□□□□□ -1.32
CiitaP79621 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CiitaP79621 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CiitaP79621 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CiitaP79621 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC6.81□□□□□ -1.32
CiitaP79621 Gm5387-201ENSMUST00000119776 857 ntBASIC6.81□□□□□ -1.32
CiitaP79621 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC6.81□□□□□ -1.32
CiitaP79621 Gm24179-201ENSMUST00000158925 127 ntBASIC6.81□□□□□ -1.32
CiitaP79621 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC6.81□□□□□ -1.32
CiitaP79621 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CiitaP79621 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
CiitaP79621 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC6.81□□□□□ -1.32
CiitaP79621 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
CiitaP79621 Gm29519-201ENSMUST00000186994 398 ntBASIC6.81□□□□□ -1.32
CiitaP79621 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
CiitaP79621 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CiitaP79621 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.81□□□□□ -1.32
CiitaP79621 Gm37758-201ENSMUST00000194275 629 ntBASIC6.81□□□□□ -1.32
CiitaP79621 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CiitaP79621 Gm5306-201ENSMUST00000203325 757 ntBASIC6.81□□□□□ -1.32
CiitaP79621 Gm45276-201ENSMUST00000209549 1086 ntBASIC6.81□□□□□ -1.32
CiitaP79621 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC6.81□□□□□ -1.32
CiitaP79621 AC132121.1-201ENSMUST00000220774 332 ntBASIC6.81□□□□□ -1.32
CiitaP79621 Gm33312-201ENSMUST00000222443 332 ntBASIC6.81□□□□□ -1.32
CiitaP79621 AC156559.2-201ENSMUST00000224403 384 ntBASIC6.81□□□□□ -1.32
CiitaP79621 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC6.81□□□□□ -1.32
CiitaP79621 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
CiitaP79621 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CiitaP79621 Olfr519-201ENSMUST00000084752 960 ntBASIC6.81□□□□□ -1.32
CiitaP79621 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CiitaP79621 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
CiitaP79621 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.81□□□□□ -1.32
CiitaP79621 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
CiitaP79621 Gm42940-201ENSMUST00000200361 2362 ntBASIC6.81□□□□□ -1.32
CiitaP79621 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CiitaP79621 Gm37911-201ENSMUST00000193099 1545 ntBASIC6.81□□□□□ -1.32
CiitaP79621 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.8□□□□□ -1.32
CiitaP79621 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CiitaP79621 AC115760.1-201ENSMUST00000225160 1327 ntBASIC6.8□□□□□ -1.32
CiitaP79621 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CiitaP79621 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
CiitaP79621 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms