Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC6.13□□□□□ -1.43
Lhx1P63006 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Lhx1P63006 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Lhx1P63006 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Lhx1P63006 Gm29650-201ENSMUST00000188485 742 ntBASIC6.13□□□□□ -1.43
Lhx1P63006 Gm8009-201ENSMUST00000191672 436 ntBASIC6.13□□□□□ -1.43
Lhx1P63006 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC6.13□□□□□ -1.43
Lhx1P63006 Gm43084-201ENSMUST00000200696 947 ntBASIC6.13□□□□□ -1.43
Lhx1P63006 Gm18789-201ENSMUST00000216115 550 ntBASIC6.13□□□□□ -1.43
Lhx1P63006 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Lhx1P63006 AC129537.1-201ENSMUST00000226596 1228 ntBASIC6.13□□□□□ -1.43
Lhx1P63006 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Lhx1P63006 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Lhx1P63006 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC6.13□□□□□ -1.43
Lhx1P63006 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Lhx1P63006 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Lhx1P63006 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Lhx1P63006 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Lhx1P63006 Gm14895-201ENSMUST00000121858 1361 ntBASIC6.13□□□□□ -1.43
Lhx1P63006 Gm10062-201ENSMUST00000072180 1470 ntBASIC6.13□□□□□ -1.43
Lhx1P63006 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC6.13□□□□□ -1.43
Lhx1P63006 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.13□□□□□ -1.43
Lhx1P63006 Gm43526-201ENSMUST00000196666 1565 ntBASIC6.13□□□□□ -1.43
Lhx1P63006 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.13□□□□□ -1.43
Lhx1P63006 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Lhx1P63006 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Lhx1P63006 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Lhx1P63006 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Lhx1P63006 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Lhx1P63006 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.13□□□□□ -1.43
Lhx1P63006 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.12□□□□□ -1.43
Lhx1P63006 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Lhx1P63006 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Lhx1P63006 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Lhx1P63006 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Lhx1P63006 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Lhx1P63006 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Lhx1P63006 Gm15332-201ENSMUST00000118386 357 ntBASIC6.12□□□□□ -1.43
Lhx1P63006 Gm12388-201ENSMUST00000119112 1887 ntBASIC6.12□□□□□ -1.43
Lhx1P63006 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Lhx1P63006 Gm14331-201ENSMUST00000120396 409 ntBASIC6.12□□□□□ -1.43
Lhx1P63006 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Lhx1P63006 Gm15696-201ENSMUST00000121730 445 ntBASIC6.12□□□□□ -1.43
Lhx1P63006 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC6.12□□□□□ -1.43
Lhx1P63006 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Lhx1P63006 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Lhx1P63006 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Lhx1P63006 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Lhx1P63006 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Lhx1P63006 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Lhx1P63006 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
Lhx1P63006 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.12□□□□□ -1.43
Lhx1P63006 Ighv1-10-201ENSMUST00000194372 355 ntBASIC6.12□□□□□ -1.43
Lhx1P63006 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Lhx1P63006 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Lhx1P63006 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC6.12□□□□□ -1.43
Lhx1P63006 Gm18290-201ENSMUST00000202900 844 ntBASIC6.12□□□□□ -1.43
Lhx1P63006 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC6.12□□□□□ -1.43
Lhx1P63006 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Lhx1P63006 Gm10688-201ENSMUST00000214985 520 ntBASIC6.12□□□□□ -1.43
Lhx1P63006 AC153971.1-201ENSMUST00000215097 3811 ntBASIC6.12□□□□□ -1.43
Lhx1P63006 Gm9293-201ENSMUST00000223096 306 ntBASIC6.12□□□□□ -1.43
Lhx1P63006 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6.12□□□□□ -1.43
Lhx1P63006 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Lhx1P63006 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC6.12□□□□□ -1.43
Lhx1P63006 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Lhx1P63006 Mir3068-201ENSMUST00000083004 136 ntBASIC6.12□□□□□ -1.43
Lhx1P63006 Gm24454-201ENSMUST00000083349 132 ntBASIC6.12□□□□□ -1.43
Lhx1P63006 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Lhx1P63006 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Lhx1P63006 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.12□□□□□ -1.43
Lhx1P63006 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.12□□□□□ -1.43
Lhx1P63006 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Lhx1P63006 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Lhx1P63006 AC156163.1-201ENSMUST00000215598 3369 ntBASIC6.12□□□□□ -1.43
Lhx1P63006 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Lhx1P63006 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
Lhx1P63006 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Lhx1P63006 Gm10258-201ENSMUST00000091270 2123 ntBASIC6.11□□□□□ -1.43
Lhx1P63006 Gm37953-201ENSMUST00000195293 1884 ntBASIC6.11□□□□□ -1.43
Lhx1P63006 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Lhx1P63006 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Lhx1P63006 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Lhx1P63006 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Lhx1P63006 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Lhx1P63006 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.11□□□□□ -1.43
Lhx1P63006 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
Lhx1P63006 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Lhx1P63006 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC6.11□□□□□ -1.43
Lhx1P63006 Gm24434-201ENSMUST00000104081 132 ntBASIC6.11□□□□□ -1.43
Lhx1P63006 Gm22371-201ENSMUST00000104588 130 ntBASIC6.11□□□□□ -1.43
Lhx1P63006 Gm12643-201ENSMUST00000116078 374 ntBASIC6.11□□□□□ -1.43
Lhx1P63006 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Lhx1P63006 Gm24435-201ENSMUST00000157886 110 ntBASIC6.11□□□□□ -1.43
Lhx1P63006 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Lhx1P63006 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC6.11□□□□□ -1.43
Lhx1P63006 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC6.11□□□□□ -1.43
Lhx1P63006 Gm28527-201ENSMUST00000185210 297 ntBASIC6.11□□□□□ -1.43
Lhx1P63006 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Lhx1P63006 Gm37265-201ENSMUST00000191698 885 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms