Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm38263-201ENSMUST00000195879 3059 ntBASIC6.03□□□□□ -1.44
Sox3P53784 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sox3P53784 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox3P53784 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sox3P53784 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sox3P53784 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox3P53784 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sox3P53784 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sox3P53784 Gm26422-201ENSMUST00000104276 132 ntBASIC6.03□□□□□ -1.44
Sox3P53784 Gm23440-201ENSMUST00000104299 130 ntBASIC6.03□□□□□ -1.44
Sox3P53784 Gm25795-201ENSMUST00000104421 132 ntBASIC6.03□□□□□ -1.44
Sox3P53784 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
Sox3P53784 Gm22676-201ENSMUST00000116972 129 ntBASIC6.03□□□□□ -1.44
Sox3P53784 Gm13114-201ENSMUST00000117605 106 ntBASIC6.03□□□□□ -1.44
Sox3P53784 Gm5834-201ENSMUST00000126680 1026 ntBASIC6.03□□□□□ -1.44
Sox3P53784 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sox3P53784 Gm25722-201ENSMUST00000157498 279 ntBASIC6.03□□□□□ -1.44
Sox3P53784 Gm24179-201ENSMUST00000158925 127 ntBASIC6.03□□□□□ -1.44
Sox3P53784 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox3P53784 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC6.03□□□□□ -1.44
Sox3P53784 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sox3P53784 Mir6952-201ENSMUST00000185092 61 ntBASIC6.03□□□□□ -1.44
Sox3P53784 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC6.03□□□□□ -1.44
Sox3P53784 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC6.03□□□□□ -1.44
Sox3P53784 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC6.03□□□□□ -1.44
Sox3P53784 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC6.03□□□□□ -1.44
Sox3P53784 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC6.03□□□□□ -1.44
Sox3P53784 Gm29072-201ENSMUST00000191149 678 ntBASIC6.03□□□□□ -1.44
Sox3P53784 Ighv5-19-201ENSMUST00000193466 297 ntBASIC6.03□□□□□ -1.44
Sox3P53784 Gm5110-201ENSMUST00000203122 1063 ntBASIC6.03□□□□□ -1.44
Sox3P53784 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sox3P53784 Gm4374-201ENSMUST00000204929 424 ntBASIC6.03□□□□□ -1.44
Sox3P53784 Gm45196-201ENSMUST00000206751 825 ntBASIC6.03□□□□□ -1.44
Sox3P53784 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC6.03□□□□□ -1.44
Sox3P53784 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox3P53784 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC6.03□□□□□ -1.44
Sox3P53784 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC6.03□□□□□ -1.44
Sox3P53784 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.03□□□□□ -1.44
Sox3P53784 AC154861.1-201ENSMUST00000223767 800 ntBASIC6.03□□□□□ -1.44
Sox3P53784 Gm8256-203ENSMUST00000228692 591 ntBASIC6.03□□□□□ -1.44
Sox3P53784 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox3P53784 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sox3P53784 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sox3P53784 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sox3P53784 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sox3P53784 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sox3P53784 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sox3P53784 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sox3P53784 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sox3P53784 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox3P53784 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox3P53784 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.03□□□□□ -1.44
Sox3P53784 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox3P53784 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
Sox3P53784 Gm37772-201ENSMUST00000191635 1394 ntBASIC6.03□□□□□ -1.44
Sox3P53784 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox3P53784 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sox3P53784 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Sox3P53784 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sox3P53784 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox3P53784 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sox3P53784 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox3P53784 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sox3P53784 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Sox3P53784 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox3P53784 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
Sox3P53784 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox3P53784 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
Sox3P53784 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Sox3P53784 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sox3P53784 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox3P53784 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Sox3P53784 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox3P53784 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox3P53784 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
Sox3P53784 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
Sox3P53784 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sox3P53784 AC154630.1-201ENSMUST00000215334 2440 ntBASIC6.02□□□□□ -1.45
Sox3P53784 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Sox3P53784 Gm24789-201ENSMUST00000104282 131 ntBASIC6.02□□□□□ -1.45
Sox3P53784 Gm12643-201ENSMUST00000116078 374 ntBASIC6.02□□□□□ -1.45
Sox3P53784 Gm13469-201ENSMUST00000118231 350 ntBASIC6.02□□□□□ -1.45
Sox3P53784 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC6.02□□□□□ -1.45
Sox3P53784 Gm13333-201ENSMUST00000119424 781 ntBASIC6.02□□□□□ -1.45
Sox3P53784 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sox3P53784 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.02□□□□□ -1.45
Sox3P53784 Gm20778-201ENSMUST00000178524 627 ntBASIC6.02□□□□□ -1.45
Sox3P53784 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC6.02□□□□□ -1.45
Sox3P53784 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC6.02□□□□□ -1.45
Sox3P53784 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.02□□□□□ -1.45
Sox3P53784 Gm18447-201ENSMUST00000187501 307 ntBASIC6.02□□□□□ -1.45
Sox3P53784 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sox3P53784 Gm37493-201ENSMUST00000193167 433 ntBASIC6.02□□□□□ -1.45
Sox3P53784 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sox3P53784 Igkv12-66-201ENSMUST00000199305 348 ntBASIC6.02□□□□□ -1.45
Sox3P53784 Gm44984-201ENSMUST00000207802 394 ntBASIC6.02□□□□□ -1.45
Sox3P53784 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC6.02□□□□□ -1.45
Sox3P53784 Gm45750-201ENSMUST00000211966 354 ntBASIC6.02□□□□□ -1.45
Sox3P53784 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC6.02□□□□□ -1.45
Sox3P53784 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms