Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC5.6□□□□□ -1.51
Rfx3P48381 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC5.6□□□□□ -1.51
Rfx3P48381 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC5.6□□□□□ -1.51
Rfx3P48381 AC122371.2-201ENSMUST00000220583 366 ntBASIC5.6□□□□□ -1.51
Rfx3P48381 Gm9321-201ENSMUST00000221179 778 ntBASIC5.6□□□□□ -1.51
Rfx3P48381 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC5.6□□□□□ -1.51
Rfx3P48381 Gm18940-201ENSMUST00000222518 871 ntBASIC5.6□□□□□ -1.51
Rfx3P48381 AC105950.1-201ENSMUST00000222637 408 ntBASIC5.6□□□□□ -1.51
Rfx3P48381 AC154861.1-201ENSMUST00000223767 800 ntBASIC5.6□□□□□ -1.51
Rfx3P48381 AC114008.1-201ENSMUST00000226193 937 ntBASIC5.6□□□□□ -1.51
Rfx3P48381 AC167013.4-201ENSMUST00000226712 317 ntBASIC5.6□□□□□ -1.51
Rfx3P48381 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx3P48381 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx3P48381 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx3P48381 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC5.6□□□□□ -1.51
Rfx3P48381 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx3P48381 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.6□□□□□ -1.51
Rfx3P48381 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Rfx3P48381 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Rfx3P48381 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Rfx3P48381 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx3P48381 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx3P48381 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx3P48381 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Rfx3P48381 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx3P48381 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.6□□□□□ -1.51
Rfx3P48381 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx3P48381 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx3P48381 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx3P48381 Gm38062-201ENSMUST00000192541 1856 ntBASIC5.6□□□□□ -1.51
Rfx3P48381 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.6□□□□□ -1.51
Rfx3P48381 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx3P48381 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Rfx3P48381 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx3P48381 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx3P48381 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC5.59□□□□□ -1.51
Rfx3P48381 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx3P48381 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Rfx3P48381 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx3P48381 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Rfx3P48381 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx3P48381 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Rfx3P48381 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx3P48381 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Rfx3P48381 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Rfx3P48381 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
Rfx3P48381 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.59□□□□□ -1.51
Rfx3P48381 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx3P48381 Gm14896-201ENSMUST00000121311 1351 ntBASIC5.59□□□□□ -1.51
Rfx3P48381 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx3P48381 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.59□□□□□ -1.51
Rfx3P48381 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx3P48381 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx3P48381 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Rfx3P48381 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Rfx3P48381 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx3P48381 Gm15016-201ENSMUST00000117300 720 ntBASIC5.59□□□□□ -1.51
Rfx3P48381 Gm14356-201ENSMUST00000118322 869 ntBASIC5.59□□□□□ -1.51
Rfx3P48381 Gm13357-201ENSMUST00000120528 537 ntBASIC5.59□□□□□ -1.51
Rfx3P48381 Gm11370-201ENSMUST00000120583 260 ntBASIC5.59□□□□□ -1.51
Rfx3P48381 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC5.59□□□□□ -1.51
Rfx3P48381 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx3P48381 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC5.59□□□□□ -1.51
Rfx3P48381 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Rfx3P48381 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx3P48381 Gm3344-201ENSMUST00000169610 603 ntBASIC5.59□□□□□ -1.51
Rfx3P48381 Gm5871-201ENSMUST00000176461 718 ntBASIC5.59□□□□□ -1.51
Rfx3P48381 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC5.59□□□□□ -1.51
Rfx3P48381 Gm26509-201ENSMUST00000180947 948 ntBASIC5.59□□□□□ -1.51
Rfx3P48381 Gm27804-201ENSMUST00000185135 119 ntBASIC5.59□□□□□ -1.51
Rfx3P48381 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Rfx3P48381 Gm29605-201ENSMUST00000190800 292 ntBASIC5.59□□□□□ -1.51
Rfx3P48381 Gm37770-201ENSMUST00000192855 772 ntBASIC5.59□□□□□ -1.51
Rfx3P48381 Gm37966-201ENSMUST00000193122 326 ntBASIC5.59□□□□□ -1.51
Rfx3P48381 Gm43048-201ENSMUST00000196101 388 ntBASIC5.59□□□□□ -1.51
Rfx3P48381 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC5.59□□□□□ -1.51
Rfx3P48381 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC5.59□□□□□ -1.51
Rfx3P48381 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC5.59□□□□□ -1.51
Rfx3P48381 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx3P48381 Gm7769-201ENSMUST00000212900 933 ntBASIC5.59□□□□□ -1.51
Rfx3P48381 Gm7557-201ENSMUST00000221935 865 ntBASIC5.59□□□□□ -1.51
Rfx3P48381 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx3P48381 AC154431.2-201ENSMUST00000225215 1055 ntBASIC5.59□□□□□ -1.51
Rfx3P48381 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Rfx3P48381 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Rfx3P48381 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Rfx3P48381 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.59□□□□□ -1.51
Rfx3P48381 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx3P48381 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx3P48381 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx3P48381 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx3P48381 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.59□□□□□ -1.51
Rfx3P48381 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx3P48381 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.59□□□□□ -1.51
Rfx3P48381 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx3P48381 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC5.59□□□□□ -1.52
Rfx3P48381 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Rfx3P48381 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Rfx3P48381 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Rfx3P48381 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms