Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Sdc1P18828 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Sdc1P18828 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Sdc1P18828 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC4.95□□□□□ -1.62
Sdc1P18828 Gm13742-201ENSMUST00000118805 457 ntBASIC4.95□□□□□ -1.62
Sdc1P18828 Gm14614-201ENSMUST00000119873 384 ntBASIC4.95□□□□□ -1.62
Sdc1P18828 Gm13877-201ENSMUST00000120614 417 ntBASIC4.95□□□□□ -1.62
Sdc1P18828 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC4.95□□□□□ -1.62
Sdc1P18828 n-R5s30-201ENSMUST00000122624 122 ntBASIC4.95□□□□□ -1.62
Sdc1P18828 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC4.95□□□□□ -1.62
Sdc1P18828 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC4.95□□□□□ -1.62
Sdc1P18828 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Sdc1P18828 Gm23497-201ENSMUST00000157738 130 ntBASIC4.95□□□□□ -1.62
Sdc1P18828 Gm9672-201ENSMUST00000166437 425 ntBASIC4.95□□□□□ -1.62
Sdc1P18828 Gm7393-201ENSMUST00000172650 739 ntBASIC4.95□□□□□ -1.62
Sdc1P18828 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC4.95□□□□□ -1.62
Sdc1P18828 Gm26197-201ENSMUST00000175033 115 ntBASIC4.95□□□□□ -1.62
Sdc1P18828 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC4.95□□□□□ -1.62
Sdc1P18828 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC4.95□□□□□ -1.62
Sdc1P18828 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Sdc1P18828 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Sdc1P18828 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Sdc1P18828 Gm43539-201ENSMUST00000196190 363 ntTSL 3 BASIC4.95□□□□□ -1.62
Sdc1P18828 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC4.95□□□□□ -1.62
Sdc1P18828 Gm22897-202ENSMUST00000197782 127 ntBASIC4.95□□□□□ -1.62
Sdc1P18828 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Sdc1P18828 Gm5554-201ENSMUST00000199726 1206 ntBASIC4.95□□□□□ -1.62
Sdc1P18828 Gm43809-201ENSMUST00000200694 338 ntTSL 3 BASIC4.95□□□□□ -1.62
Sdc1P18828 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC4.95□□□□□ -1.62
Sdc1P18828 Gm5418-201ENSMUST00000206932 528 ntBASIC4.95□□□□□ -1.62
Sdc1P18828 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC4.95□□□□□ -1.62
Sdc1P18828 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC4.95□□□□□ -1.62
Sdc1P18828 BC042761-201ENSMUST00000218344 938 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Sdc1P18828 AC192616.2-201ENSMUST00000221482 3841 ntBASIC4.95□□□□□ -1.62
Sdc1P18828 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC4.95□□□□□ -1.62
Sdc1P18828 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC4.95□□□□□ -1.62
Sdc1P18828 AC108947.1-201ENSMUST00000224274 1000 ntBASIC4.95□□□□□ -1.62
Sdc1P18828 AC154806.1-203ENSMUST00000227370 1032 ntBASIC4.95□□□□□ -1.62
Sdc1P18828 AC154640.1-202ENSMUST00000227828 496 ntBASIC4.95□□□□□ -1.62
Sdc1P18828 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Sdc1P18828 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Sdc1P18828 1700049L16Rik-201ENSMUST00000049520 543 ntBASIC4.95□□□□□ -1.62
Sdc1P18828 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Sdc1P18828 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
Sdc1P18828 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
Sdc1P18828 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC4.95□□□□□ -1.62
Sdc1P18828 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC4.95□□□□□ -1.62
Sdc1P18828 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
Sdc1P18828 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Sdc1P18828 Gm10601-201ENSMUST00000120436 1422 ntBASIC4.95□□□□□ -1.62
Sdc1P18828 Gm37255-201ENSMUST00000193302 3060 ntBASIC4.95□□□□□ -1.62
Sdc1P18828 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Sdc1P18828 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Sdc1P18828 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Sdc1P18828 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Sdc1P18828 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC4.95□□□□□ -1.62
Sdc1P18828 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
Sdc1P18828 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Sdc1P18828 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sdc1P18828 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sdc1P18828 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sdc1P18828 Gm44045-201ENSMUST00000204906 2520 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sdc1P18828 AC122357.3-201ENSMUST00000221260 2293 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC4.94□□□□□ -1.62
Sdc1P18828 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Sdc1P18828 AC115910.1-201ENSMUST00000221188 4275 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sdc1P18828 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Sdc1P18828 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sdc1P18828 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC4.94□□□□□ -1.62
Sdc1P18828 Ighv1-59-201ENSMUST00000103530 348 ntAPPRIS ALT2 BASIC4.94□□□□□ -1.62
Sdc1P18828 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Sdc1P18828 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sdc1P18828 Gm15901-201ENSMUST00000117663 941 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm14830-201ENSMUST00000121899 700 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC4.94□□□□□ -1.62
Sdc1P18828 Gm15843-201ENSMUST00000146593 529 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC4.94□□□□□ -1.62
Sdc1P18828 Gm26037-201ENSMUST00000158150 311 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC4.94□□□□□ -1.62
Sdc1P18828 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC4.94□□□□□ -1.62
Sdc1P18828 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC4.94□□□□□ -1.62
Sdc1P18828 Gm17047-201ENSMUST00000167709 430 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC4.94□□□□□ -1.62
Sdc1P18828 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC4.94□□□□□ -1.62
Sdc1P18828 Gm21959-201ENSMUST00000178439 452 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm27675-201ENSMUST00000184527 94 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28739-201ENSMUST00000185415 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28219-201ENSMUST00000185452 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28542-201ENSMUST00000185545 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28303-201ENSMUST00000185642 747 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm29244-201ENSMUST00000185825 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm29437-201ENSMUST00000185865 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm29412-201ENSMUST00000185869 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28910-201ENSMUST00000185921 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28812-201ENSMUST00000185963 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm29468-201ENSMUST00000185978 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28335-201ENSMUST00000186204 696 ntBASIC4.94□□□□□ -1.62
Sdc1P18828 Gm28854-201ENSMUST00000186218 696 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms