Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm12650-201ENSMUST00000121966 258 ntBASIC7.44□□□□□ -1.22
Col4a1P02463 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC7.44□□□□□ -1.22
Col4a1P02463 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Col4a1P02463 Gm27409-201ENSMUST00000184727 80 ntBASIC7.44□□□□□ -1.22
Col4a1P02463 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC7.44□□□□□ -1.22
Col4a1P02463 Gm28973-201ENSMUST00000189310 613 ntBASIC7.44□□□□□ -1.22
Col4a1P02463 Gm38670-201ENSMUST00000199248 77 ntBASIC7.44□□□□□ -1.22
Col4a1P02463 Gm6520-201ENSMUST00000200636 410 ntBASIC7.44□□□□□ -1.22
Col4a1P02463 AC153937.1-201ENSMUST00000218734 412 ntBASIC7.44□□□□□ -1.22
Col4a1P02463 AC154806.5-205ENSMUST00000228828 411 ntBASIC7.44□□□□□ -1.22
Col4a1P02463 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Col4a1P02463 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Col4a1P02463 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Col4a1P02463 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Col4a1P02463 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Col4a1P02463 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Col4a1P02463 Adamts6-201ENSMUST00000065766 4822 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Col4a1P02463 Mettl14-202ENSMUST00000090371 7197 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Col4a1P02463 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col4a1P02463 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Col4a1P02463 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Col4a1P02463 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC7.43□□□□□ -1.22
Col4a1P02463 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Col4a1P02463 Baz2a-208ENSMUST00000220049 8443 ntAPPRIS P2 TSL 5 BASIC7.43□□□□□ -1.22
Col4a1P02463 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col4a1P02463 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Col4a1P02463 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col4a1P02463 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Col4a1P02463 Gm43328-201ENSMUST00000198544 1434 ntBASIC7.43□□□□□ -1.22
Col4a1P02463 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Col4a1P02463 AC110043.1-201ENSMUST00000220278 1627 ntBASIC7.43□□□□□ -1.22
Col4a1P02463 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Col4a1P02463 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Col4a1P02463 Gm11481-201ENSMUST00000120069 255 ntBASIC7.43□□□□□ -1.22
Col4a1P02463 Gm14349-201ENSMUST00000137155 902 ntBASIC7.43□□□□□ -1.22
Col4a1P02463 Scarna6-201ENSMUST00000158656 265 ntBASIC7.43□□□□□ -1.22
Col4a1P02463 Gm25489-201ENSMUST00000158727 141 ntBASIC7.43□□□□□ -1.22
Col4a1P02463 Gm23774-201ENSMUST00000158990 131 ntBASIC7.43□□□□□ -1.22
Col4a1P02463 Mir6986-201ENSMUST00000184483 58 ntBASIC7.43□□□□□ -1.22
Col4a1P02463 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Col4a1P02463 Gm29813-201ENSMUST00000195856 447 ntBASIC7.43□□□□□ -1.22
Col4a1P02463 Gm8920-201ENSMUST00000196153 924 ntBASIC7.43□□□□□ -1.22
Col4a1P02463 n-R5s173-201ENSMUST00000082620 119 ntBASIC7.43□□□□□ -1.22
Col4a1P02463 n-R5s161-201ENSMUST00000083728 114 ntBASIC7.43□□□□□ -1.22
Col4a1P02463 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col4a1P02463 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col4a1P02463 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Col4a1P02463 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col4a1P02463 Igf1r-201ENSMUST00000005671 11409 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col4a1P02463 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a1P02463 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a1P02463 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a1P02463 Gm44697-201ENSMUST00000207756 1679 ntBASIC7.42□□□□□ -1.22
Col4a1P02463 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a1P02463 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC7.42□□□□□ -1.22
Col4a1P02463 Gm16205-201ENSMUST00000117720 1027 ntBASIC7.42□□□□□ -1.22
Col4a1P02463 Gm15331-201ENSMUST00000120225 385 ntBASIC7.42□□□□□ -1.22
Col4a1P02463 Gm2959-201ENSMUST00000169844 621 ntBASIC7.42□□□□□ -1.22
Col4a1P02463 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
Col4a1P02463 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a1P02463 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC7.42□□□□□ -1.22
Col4a1P02463 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC7.42□□□□□ -1.22
Col4a1P02463 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC7.42□□□□□ -1.22
Col4a1P02463 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a1P02463 Gm22807-201ENSMUST00000082737 129 ntBASIC7.42□□□□□ -1.22
Col4a1P02463 Gm23238-201ENSMUST00000083007 164 ntBASIC7.42□□□□□ -1.22
Col4a1P02463 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a1P02463 Gm44043-201ENSMUST00000203426 3253 ntBASIC7.42□□□□□ -1.22
Col4a1P02463 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Col4a1P02463 Gpatch8-206ENSMUST00000143842 6871 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Col4a1P02463 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a1P02463 Fam135b-201ENSMUST00000022953 4623 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Col4a1P02463 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a1P02463 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a1P02463 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Col4a1P02463 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a1P02463 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC7.42□□□□□ -1.22
Col4a1P02463 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a1P02463 Gm3608-201ENSMUST00000086725 2858 ntBASIC7.42□□□□□ -1.22
Col4a1P02463 Gm37090-201ENSMUST00000195694 4105 ntBASIC7.42□□□□□ -1.22
Col4a1P02463 Exoc5-207ENSMUST00000162175 12699 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a1P02463 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC7.42□□□□□ -1.22
Col4a1P02463 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Col4a1P02463 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col4a1P02463 Nsd3-201ENSMUST00000084026 9945 ntAPPRIS P2 TSL 2 BASIC7.41□□□□□ -1.22
Col4a1P02463 Gm15715-201ENSMUST00000118032 283 ntBASIC7.41□□□□□ -1.22
Col4a1P02463 Gm11197-201ENSMUST00000145158 839 ntBASIC7.41□□□□□ -1.22
Col4a1P02463 Gm24216-201ENSMUST00000158259 117 ntBASIC7.41□□□□□ -1.22
Col4a1P02463 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Col4a1P02463 Gm7335-201ENSMUST00000172475 373 ntBASIC7.41□□□□□ -1.22
Col4a1P02463 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC7.41□□□□□ -1.22
Col4a1P02463 Gm37196-201ENSMUST00000194762 906 ntBASIC7.41□□□□□ -1.22
Col4a1P02463 Gm18427-201ENSMUST00000195422 515 ntBASIC7.41□□□□□ -1.22
Col4a1P02463 Gm18705-201ENSMUST00000215985 913 ntBASIC7.41□□□□□ -1.22
Col4a1P02463 Gm33037-201ENSMUST00000217927 642 ntTSL 3 BASIC7.41□□□□□ -1.22
Col4a1P02463 AC164164.2-201ENSMUST00000221809 785 ntBASIC7.41□□□□□ -1.22
Col4a1P02463 Gm24029-201ENSMUST00000083928 143 ntBASIC7.41□□□□□ -1.22
Col4a1P02463 Gm17165-201ENSMUST00000096155 493 ntBASIC7.41□□□□□ -1.22
Col4a1P02463 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Col4a1P02463 Gm29438-201ENSMUST00000191298 2613 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms