Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm38085-201ENSMUST00000195785 3062 ntBASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm13899-201ENSMUST00000121519 1255 ntBASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm6477-201ENSMUST00000217098 764 ntBASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm45117-201ENSMUST00000207250 1774 ntBASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Gm37092-201ENSMUST00000193381 1518 ntBASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccdc180J3QNE4 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccdc180J3QNE4 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Ccdc180J3QNE4 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccdc180J3QNE4 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccdc180J3QNE4 Gm25415-201ENSMUST00000104220 132 ntBASIC11.27□□□□□ -0.6
Ccdc180J3QNE4 Gm15237-201ENSMUST00000122104 469 ntBASIC11.27□□□□□ -0.6
Ccdc180J3QNE4 Gm15501-202ENSMUST00000140687 625 ntBASIC11.27□□□□□ -0.6
Ccdc180J3QNE4 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ccdc180J3QNE4 Gm25152-201ENSMUST00000157117 114 ntBASIC11.27□□□□□ -0.6
Ccdc180J3QNE4 Gm21399-201ENSMUST00000180210 597 ntBASIC11.27□□□□□ -0.6
Ccdc180J3QNE4 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC11.27□□□□□ -0.6
Ccdc180J3QNE4 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC11.27□□□□□ -0.6
Ccdc180J3QNE4 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ccdc180J3QNE4 Gm9202-201ENSMUST00000223036 437 ntBASIC11.27□□□□□ -0.6
Ccdc180J3QNE4 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Ccdc180J3QNE4 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Ccdc180J3QNE4 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ccdc180J3QNE4 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm43981-201ENSMUST00000203285 1467 ntBASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm43707-201ENSMUST00000196451 3187 ntBASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm42440-201ENSMUST00000197906 2284 ntBASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm13451-201ENSMUST00000117649 592 ntBASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm15531-201ENSMUST00000118062 252 ntBASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm12040-201ENSMUST00000118357 537 ntBASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Gm15425-201ENSMUST00000119013 2711 ntBASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccdc180J3QNE4 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ccdc180J3QNE4 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc180J3QNE4 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Ccdc180J3QNE4 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc180J3QNE4 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc180J3QNE4 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccdc180J3QNE4 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ccdc180J3QNE4 Gm14512-201ENSMUST00000117924 230 ntBASIC11.26□□□□□ -0.61
Ccdc180J3QNE4 Gm6744-201ENSMUST00000119303 543 ntBASIC11.26□□□□□ -0.61
Ccdc180J3QNE4 Gm14521-201ENSMUST00000119545 350 ntBASIC11.26□□□□□ -0.61
Ccdc180J3QNE4 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccdc180J3QNE4 Gm4764-201ENSMUST00000130207 1233 ntBASIC11.26□□□□□ -0.61
Ccdc180J3QNE4 Gm16531-201ENSMUST00000180658 967 ntBASIC11.26□□□□□ -0.61
Ccdc180J3QNE4 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms