Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 AC130831.1-201ENSMUST00000224546 1474 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm25725-201ENSMUST00000104528 130 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm15110-201ENSMUST00000117545 881 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm13739-201ENSMUST00000118020 530 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm15715-201ENSMUST00000118032 283 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm14727-201ENSMUST00000118526 525 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm11357-201ENSMUST00000119758 954 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm15390-201ENSMUST00000120323 738 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm13118-201ENSMUST00000120402 549 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm11404-201ENSMUST00000120872 494 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm14721-201ENSMUST00000121381 525 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm23079-201ENSMUST00000157847 117 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm23031-201ENSMUST00000157998 119 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm24498-201ENSMUST00000158445 102 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm7991-201ENSMUST00000168668 591 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm7393-201ENSMUST00000172650 739 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm17973-201ENSMUST00000174509 520 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Mir6357-201ENSMUST00000184246 104 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm20813-201ENSMUST00000186646 705 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm28859-201ENSMUST00000186650 616 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm21617-201ENSMUST00000188297 691 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm43367-201ENSMUST00000199986 625 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm42965-201ENSMUST00000201254 250 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 AC133948.2-201ENSMUST00000217850 378 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 AC122301.1-201ENSMUST00000219625 507 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 CT009742.1-201ENSMUST00000222507 702 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 AC134869.2-201ENSMUST00000225788 421 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 AC140393.2-201ENSMUST00000226894 943 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 CT030684.2-201ENSMUST00000228946 826 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm24405-201ENSMUST00000083033 167 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm25005-201ENSMUST00000083812 156 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm7731-201ENSMUST00000091759 470 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 AC129308.2-203ENSMUST00000224109 2385 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm44255-201ENSMUST00000203456 2053 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm13058-201ENSMUST00000117097 1435 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 AC117608.1-201ENSMUST00000225500 3418 ntBASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
Pcdh1F7BJK1 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.23□□□□□ -1.41
Pcdh1F7BJK1 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Pcdh1F7BJK1 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Pcdh1F7BJK1 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Pcdh1F7BJK1 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Pcdh1F7BJK1 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Pcdh1F7BJK1 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Pcdh1F7BJK1 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Pcdh1F7BJK1 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.23□□□□□ -1.41
Pcdh1F7BJK1 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Pcdh1F7BJK1 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Pcdh1F7BJK1 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC6.23□□□□□ -1.41
Pcdh1F7BJK1 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Pcdh1F7BJK1 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Pcdh1F7BJK1 AC168056.3-201ENSMUST00000225395 2540 ntBASIC6.23□□□□□ -1.41
Pcdh1F7BJK1 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.23□□□□□ -1.41
Pcdh1F7BJK1 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Pcdh1F7BJK1 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC6.23□□□□□ -1.41
Pcdh1F7BJK1 Gm6743-201ENSMUST00000117345 1066 ntBASIC6.23□□□□□ -1.41
Pcdh1F7BJK1 Gm13163-201ENSMUST00000119875 336 ntBASIC6.23□□□□□ -1.41
Pcdh1F7BJK1 Gm13525-201ENSMUST00000120607 478 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms