Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm22371-201ENSMUST00000104588 130 ntBASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Gm12890-201ENSMUST00000120885 373 ntBASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Gm22518-201ENSMUST00000158267 68 ntBASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Gm23450-201ENSMUST00000178285 91 ntBASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Gm37770-201ENSMUST00000192855 772 ntBASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Gm43392-201ENSMUST00000196560 434 ntBASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Gm18467-201ENSMUST00000208805 434 ntBASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Gm45343-201ENSMUST00000210452 828 ntBASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 AC131654.1-201ENSMUST00000219675 745 ntBASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Gm45297-201ENSMUST00000209893 3483 ntBASIC6.28□□□□□ -1.4
Srp54bE9PXC0 AC123629.1-201ENSMUST00000225669 1364 ntBASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.28□□□□□ -1.4
Srp54bE9PXC0 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 AC022775.1-201ENSMUST00000228163 2698 ntBASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Gm13114-201ENSMUST00000117605 106 ntBASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Gm15901-201ENSMUST00000117663 941 ntBASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Gm14712-201ENSMUST00000120195 772 ntBASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Gm15781-201ENSMUST00000120216 323 ntBASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Gm22655-201ENSMUST00000174949 96 ntBASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Mir6367-201ENSMUST00000183385 102 ntBASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Gm8869-201ENSMUST00000195222 947 ntBASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Gm4332-201ENSMUST00000196114 346 ntBASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Gm7570-201ENSMUST00000215246 698 ntBASIC6.27□□□□□ -1.41
Srp54bE9PXC0 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Gm33312-201ENSMUST00000222443 332 ntBASIC6.27□□□□□ -1.41
Srp54bE9PXC0 CT030254.1-201ENSMUST00000225450 1078 ntBASIC6.27□□□□□ -1.41
Srp54bE9PXC0 AC164426.1-201ENSMUST00000225745 929 ntBASIC6.27□□□□□ -1.41
Srp54bE9PXC0 AC166574.3-201ENSMUST00000226725 367 ntBASIC6.27□□□□□ -1.41
Srp54bE9PXC0 AC120375.2-202ENSMUST00000228722 397 ntBASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Srp54bE9PXC0 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.26□□□□□ -1.41
Srp54bE9PXC0 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Srp54bE9PXC0 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Srp54bE9PXC0 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC6.26□□□□□ -1.41
Srp54bE9PXC0 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.26□□□□□ -1.41
Srp54bE9PXC0 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms