Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm43019-201ENSMUST00000196948 2863 ntBASIC5.22□□□□□ -1.57
Col6a4A2AX52 Gm20486-201ENSMUST00000101544 128 ntBASIC5.22□□□□□ -1.57
Col6a4A2AX52 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Gm11737-201ENSMUST00000118713 468 ntBASIC5.22□□□□□ -1.57
Col6a4A2AX52 Gm4764-201ENSMUST00000130207 1233 ntBASIC5.22□□□□□ -1.57
Col6a4A2AX52 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Gm22895-201ENSMUST00000157508 308 ntBASIC5.22□□□□□ -1.57
Col6a4A2AX52 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC5.22□□□□□ -1.57
Col6a4A2AX52 Gm28640-201ENSMUST00000190918 550 ntBASIC5.22□□□□□ -1.57
Col6a4A2AX52 AC115793.1-201ENSMUST00000216605 215 ntBASIC5.22□□□□□ -1.57
Col6a4A2AX52 AC156037.1-201ENSMUST00000221133 127 ntBASIC5.22□□□□□ -1.57
Col6a4A2AX52 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.22□□□□□ -1.57
Col6a4A2AX52 AC125543.3-201ENSMUST00000221991 126 ntBASIC5.22□□□□□ -1.57
Col6a4A2AX52 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a4A2AX52 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Col6a4A2AX52 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a4A2AX52 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC5.22□□□□□ -1.57
Col6a4A2AX52 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Col6a4A2AX52 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Gm37953-201ENSMUST00000195293 1884 ntBASIC5.22□□□□□ -1.57
Col6a4A2AX52 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Vmn2r40-201ENSMUST00000171942 3623 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Gm22676-201ENSMUST00000116972 129 ntBASIC5.22□□□□□ -1.57
Col6a4A2AX52 Gm14550-201ENSMUST00000117918 407 ntBASIC5.22□□□□□ -1.57
Col6a4A2AX52 Gm25057-201ENSMUST00000157366 88 ntBASIC5.22□□□□□ -1.57
Col6a4A2AX52 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.22□□□□□ -1.57
Col6a4A2AX52 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Col6a4A2AX52 Gm24200-201ENSMUST00000082955 157 ntBASIC5.22□□□□□ -1.57
Col6a4A2AX52 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC5.22□□□□□ -1.57
Col6a4A2AX52 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
Col6a4A2AX52 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Col6a4A2AX52 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
Col6a4A2AX52 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Col6a4A2AX52 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.57
Col6a4A2AX52 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC5.21□□□□□ -1.57
Col6a4A2AX52 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.21□□□□□ -1.57
Col6a4A2AX52 Gm37423-201ENSMUST00000194246 3342 ntBASIC5.21□□□□□ -1.57
Col6a4A2AX52 Gm37518-201ENSMUST00000194930 2603 ntBASIC5.21□□□□□ -1.57
Col6a4A2AX52 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a4A2AX52 Gm13416-201ENSMUST00000117264 1612 ntBASIC5.21□□□□□ -1.58
Col6a4A2AX52 AC122305.1-201ENSMUST00000214803 3921 ntBASIC5.21□□□□□ -1.58
Col6a4A2AX52 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a4A2AX52 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Col6a4A2AX52 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a4A2AX52 Gm14783-201ENSMUST00000118900 663 ntBASIC5.21□□□□□ -1.58
Col6a4A2AX52 Gm14601-201ENSMUST00000120892 236 ntBASIC5.21□□□□□ -1.58
Col6a4A2AX52 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a4A2AX52 Gm18117-201ENSMUST00000187720 742 ntBASIC5.21□□□□□ -1.58
Col6a4A2AX52 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC5.21□□□□□ -1.58
Col6a4A2AX52 Gm37196-201ENSMUST00000194762 906 ntBASIC5.21□□□□□ -1.58
Col6a4A2AX52 Gm2225-201ENSMUST00000209570 377 ntBASIC5.21□□□□□ -1.58
Col6a4A2AX52 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col6a4A2AX52 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a4A2AX52 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC5.21□□□□□ -1.58
Col6a4A2AX52 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Col6a4A2AX52 AL450321.1-201ENSMUST00000220600 3550 ntBASIC5.21□□□□□ -1.58
Col6a4A2AX52 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
Col6a4A2AX52 Gm37255-201ENSMUST00000193302 3060 ntBASIC5.21□□□□□ -1.58
Col6a4A2AX52 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC5.21□□□□□ -1.58
Col6a4A2AX52 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Col6a4A2AX52 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Col6a4A2AX52 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Col6a4A2AX52 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Col6a4A2AX52 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a4A2AX52 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a4A2AX52 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Col6a4A2AX52 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm16423-201ENSMUST00000120078 947 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm13998-201ENSMUST00000120952 335 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm23632-201ENSMUST00000175289 125 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm37770-201ENSMUST00000192855 772 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm19182-201ENSMUST00000207139 577 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Gm19256-201ENSMUST00000218550 231 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.2□□□□□ -1.58
Col6a4A2AX52 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Col6a4A2AX52 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms