Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm16074-201ENSMUST00000119524 444 ntBASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Gm11341-201ENSMUST00000122316 447 ntBASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Gm29663-201ENSMUST00000186962 853 ntBASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Gm42581-201ENSMUST00000201774 966 ntBASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Gm2602-201ENSMUST00000202112 571 ntBASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Gm8863-201ENSMUST00000216630 926 ntBASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 AC104906.1-201ENSMUST00000218122 913 ntBASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Gm9237-201ENSMUST00000221499 548 ntBASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Gm9292-201ENSMUST00000222008 710 ntBASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 AC154795.1-201ENSMUST00000225611 364 ntBASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 CT010453.2-201ENSMUST00000227005 483 ntBASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Gm15500-201ENSMUST00000071523 894 ntBASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Gm22351-201ENSMUST00000083925 107 ntBASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Gm36947-201ENSMUST00000194709 2249 ntBASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Gm7108-201ENSMUST00000118038 3407 ntBASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Upk3aQ9JKX8 CT010577.1-202ENSMUST00000226187 1903 ntBASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Gm9521-201ENSMUST00000206656 1516 ntBASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 CT009757.5-201ENSMUST00000221858 3425 ntBASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Gm15696-201ENSMUST00000121730 445 ntBASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Gm3344-201ENSMUST00000169610 603 ntBASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Gm22701-201ENSMUST00000175371 291 ntBASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Gm29111-201ENSMUST00000188823 696 ntBASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Gm28584-201ENSMUST00000191489 696 ntBASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Gm38138-201ENSMUST00000193274 696 ntBASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Gm37991-201ENSMUST00000194297 696 ntBASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Gm7343-201ENSMUST00000194510 1061 ntBASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Igkv4-73-201ENSMUST00000199760 358 ntBASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Gm6070-201ENSMUST00000207275 419 ntBASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 AC158595.1-201ENSMUST00000217989 1435 ntBASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 CT010431.1-201ENSMUST00000221249 1080 ntBASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 AC116596.2-203ENSMUST00000227345 731 ntBASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Gm37914-201ENSMUST00000195317 2679 ntBASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Upk3aQ9JKX8 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
Upk3aQ9JKX8 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Upk3aQ9JKX8 Gm37086-201ENSMUST00000193082 3452 ntBASIC5.94□□□□□ -1.46
Upk3aQ9JKX8 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Upk3aQ9JKX8 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Upk3aQ9JKX8 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Upk3aQ9JKX8 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Upk3aQ9JKX8 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms