Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm45344-201ENSMUST00000211610 341 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm8767-201ENSMUST00000215786 1070 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 AC132954.2-201ENSMUST00000222400 403 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Zfp429-203ENSMUST00000224684 524 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 AC124715.2-201ENSMUST00000226762 617 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 AC107452.2-201ENSMUST00000228415 363 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm24921-201ENSMUST00000083024 107 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 H2al1j-201ENSMUST00000091180 330 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm42568-201ENSMUST00000195639 1841 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Gm37968-201ENSMUST00000195131 3201 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 AC121094.1-201ENSMUST00000224766 1345 ntBASIC7.01□□□□□ -1.29
Trim39Q9ESN2 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim39Q9ESN2 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim39Q9ESN2 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim39Q9ESN2 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim39Q9ESN2 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim39Q9ESN2 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim39Q9ESN2 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm38315-201ENSMUST00000194286 2437 ntBASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC7□□□□□ -1.29
Trim39Q9ESN2 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Trim39Q9ESN2 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Trim39Q9ESN2 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC7□□□□□ -1.29
Trim39Q9ESN2 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm43498-201ENSMUST00000202002 1486 ntBASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC7□□□□□ -1.29
Trim39Q9ESN2 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim39Q9ESN2 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim39Q9ESN2 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
Trim39Q9ESN2 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm15108-201ENSMUST00000116160 803 ntBASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm4911-201ENSMUST00000119388 945 ntBASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm11606-201ENSMUST00000120706 617 ntBASIC7□□□□□ -1.29
Trim39Q9ESN2 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm13940-201ENSMUST00000121023 301 ntBASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC7□□□□□ -1.29
Trim39Q9ESN2 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm22847-201ENSMUST00000157707 105 ntBASIC7□□□□□ -1.29
Trim39Q9ESN2 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm6808-201ENSMUST00000162341 807 ntBASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm20617-201ENSMUST00000177082 717 ntTSL 3 BASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC7□□□□□ -1.29
Trim39Q9ESN2 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC7□□□□□ -1.29
Trim39Q9ESN2 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC7□□□□□ -1.29
Trim39Q9ESN2 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm6100-201ENSMUST00000180253 403 ntBASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm28802-201ENSMUST00000188624 944 ntBASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm17867-201ENSMUST00000188981 391 ntBASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm29496-201ENSMUST00000189854 693 ntBASIC7□□□□□ -1.29
Trim39Q9ESN2 1700096J18Rik-201ENSMUST00000190043 482 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm37825-201ENSMUST00000193141 904 ntTSL 5 BASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim39Q9ESN2 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm1969-201ENSMUST00000198125 1220 ntBASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm42489-201ENSMUST00000198964 669 ntBASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm43850-201ENSMUST00000202021 578 ntBASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC7□□□□□ -1.29
Trim39Q9ESN2 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC7□□□□□ -1.29
Trim39Q9ESN2 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC7□□□□□ -1.29
Trim39Q9ESN2 AC153561.1-201ENSMUST00000215943 469 ntBASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm19047-201ENSMUST00000220922 1099 ntBASIC7□□□□□ -1.29
Trim39Q9ESN2 AC161252.2-201ENSMUST00000224978 374 ntBASIC7□□□□□ -1.29
Trim39Q9ESN2 CT030238.4-202ENSMUST00000226143 745 ntBASIC7□□□□□ -1.29
Trim39Q9ESN2 AC132317.2-201ENSMUST00000227301 519 ntBASIC7□□□□□ -1.29
Trim39Q9ESN2 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC7□□□□□ -1.29
Trim39Q9ESN2 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC7□□□□□ -1.29
Trim39Q9ESN2 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm23407-201ENSMUST00000082538 91 ntBASIC7□□□□□ -1.29
Trim39Q9ESN2 Gm24143-201ENSMUST00000082633 145 ntBASIC7□□□□□ -1.29
Trim39Q9ESN2 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC7□□□□□ -1.29
Trim39Q9ESN2 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
Trim39Q9ESN2 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Trim39Q9ESN2 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim39Q9ESN2 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms