Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ube3bQ9ES34 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Ube3bQ9ES34 Gm38373-201ENSMUST00000192042 288 ntBASIC8.7□□□□□ -1.02
Ube3bQ9ES34 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC8.7□□□□□ -1.02
Ube3bQ9ES34 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Ube3bQ9ES34 Gm44722-201ENSMUST00000206473 436 ntBASIC8.7□□□□□ -1.02
Ube3bQ9ES34 Gm18655-201ENSMUST00000214802 1090 ntBASIC8.7□□□□□ -1.02
Ube3bQ9ES34 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC8.7□□□□□ -1.02
Ube3bQ9ES34 AC122301.1-201ENSMUST00000219625 507 ntBASIC8.7□□□□□ -1.02
Ube3bQ9ES34 AC154795.1-201ENSMUST00000225611 364 ntBASIC8.7□□□□□ -1.02
Ube3bQ9ES34 Mir138-2-201ENSMUST00000083578 71 ntBASIC8.7□□□□□ -1.02
Ube3bQ9ES34 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ube3bQ9ES34 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ube3bQ9ES34 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
Ube3bQ9ES34 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC8.7□□□□□ -1.02
Ube3bQ9ES34 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC8.7□□□□□ -1.02
Ube3bQ9ES34 Pramel-201ENSMUST00000118979 1383 ntBASIC8.7□□□□□ -1.02
Ube3bQ9ES34 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC8.7□□□□□ -1.02
Ube3bQ9ES34 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ube3bQ9ES34 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Ube3bQ9ES34 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Ube3bQ9ES34 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ube3bQ9ES34 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ube3bQ9ES34 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Ube3bQ9ES34 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC8.7□□□□□ -1.02
Ube3bQ9ES34 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC8.7□□□□□ -1.02
Ube3bQ9ES34 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC8.7□□□□□ -1.02
Ube3bQ9ES34 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Gm43775-201ENSMUST00000201019 3395 ntBASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Gm13878-201ENSMUST00000117986 577 ntBASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Gm13798-201ENSMUST00000118285 139 ntBASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Gm14788-201ENSMUST00000119457 375 ntBASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Gm15390-201ENSMUST00000120323 738 ntBASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Gm16026-205ENSMUST00000162923 641 ntBASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Gm8183-201ENSMUST00000183134 980 ntBASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Gm29412-201ENSMUST00000185869 696 ntBASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Gm29634-201ENSMUST00000188467 696 ntBASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Gm28699-201ENSMUST00000189193 696 ntBASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Gm28837-201ENSMUST00000190397 696 ntBASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Gm28070-201ENSMUST00000191502 445 ntBASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Gm7496-201ENSMUST00000192573 1034 ntBASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 AC165292.1-201ENSMUST00000215218 620 ntBASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 AC101984.1-201ENSMUST00000219639 402 ntBASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 AC131117.2-202ENSMUST00000224539 547 ntBASIC8.69□□□□□ -1.02
Ube3bQ9ES34 AC121997.2-202ENSMUST00000227158 939 ntBASIC8.69□□□□□ -1.02
Ube3bQ9ES34 AC102291.1-201ENSMUST00000227164 529 ntBASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Supt20-202ENSMUST00000170552 1968 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Gm45201-201ENSMUST00000207187 2679 ntBASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 AC153881.3-201ENSMUST00000218494 1561 ntBASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Ube3bQ9ES34 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 AC122426.2-201ENSMUST00000216522 2947 ntBASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Gm18259-201ENSMUST00000220991 2010 ntBASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Gm22707-201ENSMUST00000103834 110 ntBASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Gm15175-201ENSMUST00000117629 132 ntBASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Gm12879-201ENSMUST00000120003 1182 ntBASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ube3bQ9ES34 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC8.68□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms