Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Gm32983-201ENSMUST00000208500 505 ntBASIC5.56□□□□□ -1.52
Krt88Q9CPR6 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC5.56□□□□□ -1.52
Krt88Q9CPR6 Gm6575-201ENSMUST00000222946 697 ntBASIC5.56□□□□□ -1.52
Krt88Q9CPR6 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Krt88Q9CPR6 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Krt88Q9CPR6 n-R5s180-201ENSMUST00000082770 106 ntBASIC5.56□□□□□ -1.52
Krt88Q9CPR6 Gm23054-201ENSMUST00000082804 162 ntBASIC5.56□□□□□ -1.52
Krt88Q9CPR6 Gm5446-201ENSMUST00000091762 784 ntBASIC5.56□□□□□ -1.52
Krt88Q9CPR6 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Krt88Q9CPR6 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Krt88Q9CPR6 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Krt88Q9CPR6 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC5.56□□□□□ -1.52
Krt88Q9CPR6 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Krt88Q9CPR6 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Krt88Q9CPR6 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Krt88Q9CPR6 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Krt88Q9CPR6 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Krt88Q9CPR6 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Krt88Q9CPR6 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.56□□□□□ -1.52
Krt88Q9CPR6 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.56□□□□□ -1.52
Krt88Q9CPR6 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.56□□□□□ -1.52
Krt88Q9CPR6 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.56□□□□□ -1.52
Krt88Q9CPR6 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.56□□□□□ -1.52
Krt88Q9CPR6 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Krt88Q9CPR6 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Krt88Q9CPR6 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Krt88Q9CPR6 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Krt88Q9CPR6 Gm5949-201ENSMUST00000213468 1421 ntBASIC5.56□□□□□ -1.52
Krt88Q9CPR6 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Krt88Q9CPR6 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 AC159196.3-201ENSMUST00000224307 1841 ntBASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Gm14988-201ENSMUST00000117224 1548 ntBASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Gm38284-201ENSMUST00000194803 4539 ntBASIC5.55□□□□□ -1.52
Krt88Q9CPR6 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Gm25344-201ENSMUST00000104503 132 ntBASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Gm13423-201ENSMUST00000117205 888 ntBASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Gm15016-201ENSMUST00000117300 720 ntBASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Gm13444-201ENSMUST00000119445 522 ntBASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Gm12174-201ENSMUST00000119853 813 ntBASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Gm6142-201ENSMUST00000120290 325 ntBASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Gm5578-201ENSMUST00000121490 1236 ntBASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC5.55□□□□□ -1.52
Krt88Q9CPR6 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Gm23553-201ENSMUST00000157817 295 ntBASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Gm24545-201ENSMUST00000158651 85 ntBASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Gm27295-201ENSMUST00000184264 153 ntBASIC5.55□□□□□ -1.52
Krt88Q9CPR6 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Ighv1-73-201ENSMUST00000197435 352 ntBASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Gm30646-201ENSMUST00000207662 180 ntBASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 AC124510.2-201ENSMUST00000221958 683 ntBASIC5.55□□□□□ -1.52
Krt88Q9CPR6 CT030238.3-201ENSMUST00000227352 875 ntBASIC5.55□□□□□ -1.52
Krt88Q9CPR6 AC131033.1-201ENSMUST00000228223 279 ntBASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Gm43981-201ENSMUST00000203285 1467 ntBASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Gm4994-201ENSMUST00000118379 2187 ntBASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Gm37755-201ENSMUST00000195880 2179 ntBASIC5.55□□□□□ -1.52
Krt88Q9CPR6 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Krt88Q9CPR6 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Krt88Q9CPR6 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Krt88Q9CPR6 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Krt88Q9CPR6 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Krt88Q9CPR6 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Krt88Q9CPR6 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Krt88Q9CPR6 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Krt88Q9CPR6 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Krt88Q9CPR6 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC5.54□□□□□ -1.52
Krt88Q9CPR6 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Krt88Q9CPR6 Gm42998-201ENSMUST00000197053 2371 ntBASIC5.54□□□□□ -1.52
Krt88Q9CPR6 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Krt88Q9CPR6 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Krt88Q9CPR6 Gm22103-201ENSMUST00000116733 121 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms